RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.87
DNMT3A-205ENST00000402667 PTPN12Q05209 780 aaKnown RBP20.45■□□□□ 0.87
DNMT3A-205ENST00000402667 FOXD4L5Q5VV16 416 aaPredicted RBP20.45■□□□□ 0.87
DNMT3A-205ENST00000402667 FOXD4L4Q8WXT5 416 aaPredicted RBP20.45■□□□□ 0.87
DNMT3A-205ENST00000402667 BOLA2Q9H3K6 86 aa20.45■□□□□ 0.87
DNMT3A-205ENST00000402667 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
DNMT3A-205ENST00000402667 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
DNMT3A-205ENST00000402667 CHAMP1Q96JM3 812 aa20.45■□□□□ 0.86
DNMT3A-205ENST00000402667 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
DNMT3A-205ENST00000402667 AFDNP55196 1824 aaKnown RBP20.45■□□□□ 0.86
DNMT3A-205ENST00000402667 HIP1O00291 1037 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 CASP7P55210 303 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 CARD10Q9BWT7 1032 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 ZNF335Q9H4Z2 1342 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 IL2RBP14784 551 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 AK2P54819 239 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
DNMT3A-205ENST00000402667 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
DNMT3A-205ENST00000402667 KCNB2Q92953 911 aa20.43■□□□□ 0.86
DNMT3A-205ENST00000402667 NMIQ13287 307 aaPredicted RBP20.43■□□□□ 0.86
DNMT3A-205ENST00000402667 DDX54Q8TDD1 881 aaKnown RBP20.43■□□□□ 0.86
DNMT3A-205ENST00000402667 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 NECTIN1Q15223 517 aa20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 CCDC171Q6TFL3 1326 aa20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 TTLL7Q6ZT98 887 aa20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 RUFY3Q7L099 469 aa20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 LIMCH1Q9UPQ0 1083 aa20.42■□□□□ 0.86
DNMT3A-205ENST00000402667 A1BGP04217 495 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 CPA1P15085 419 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 TFCP2Q12800 502 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 TNNI3KQ59H18 835 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 FAM43AQ8N2R8 423 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 SNRKQ9NRH2 765 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 FPGT-TNNI3KV9GXZ4 949 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 H7C1W4 665 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 ADCK5Q3MIX3 580 aa20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 CAVIN1Q6NZI2 390 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 DBNLQ9UJU6 430 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-205ENST00000402667 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 MAP4K1Q92918 833 aa20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 JAKMIP1Q96N16 626 aaKnown RBP20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 LARP6Q9BRS8 491 aaKnown RBP20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 TM6SF1Q9BZW5 370 aa20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 UBR2Q8IWV8 1755 aa20.4■□□□□ 0.86
DNMT3A-205ENST00000402667 KDM4FA0A1W2PPD8 638 aa20.39■□□□□ 0.86
DNMT3A-205ENST00000402667 LMBR1LQ6UX01 489 aa20.39■□□□□ 0.86
DNMT3A-205ENST00000402667 RBM8AQ9Y5S9 174 aaKnown RBP20.39■□□□□ 0.86
DNMT3A-205ENST00000402667 KCPQ6ZWJ8 1503 aa20.39■□□□□ 0.86
DNMT3A-205ENST00000402667 A0A0D9SFI3 127 aa20.39■□□□□ 0.85
DNMT3A-205ENST00000402667 EVA1CP58658 441 aa20.39■□□□□ 0.85
DNMT3A-205ENST00000402667 ZSWIM6Q9HCJ5 1215 aa20.39■□□□□ 0.85
DNMT3A-205ENST00000402667 ATP5JP18859 108 aa20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 ZNF445P59923 1031 aa20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 FOXO4P98177 505 aa20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 CREB3L3Q68CJ9 461 aa20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 CWC25Q9NXE8 425 aaPredicted RBP20.38■□□□□ 0.85
DNMT3A-205ENST00000402667 ZKSCAN1P17029 563 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 ZSCAN23Q3MJ62 389 aa20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 CYP46A1Q9Y6A2 500 aa20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 ABCA3Q99758 1704 aa20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 KCNJ4P48050 445 aa20.37■□□□□ 0.85
DNMT3A-205ENST00000402667 ZBTB3Q9H5J0 574 aa20.36■□□□□ 0.85
DNMT3A-205ENST00000402667 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.36■□□□□ 0.85
DNMT3A-205ENST00000402667 SHANK3Q9BYB0 1731 aa20.36■□□□□ 0.85
DNMT3A-205ENST00000402667 MED23Q9ULK4 1368 aa20.36■□□□□ 0.85
DNMT3A-205ENST00000402667 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 DBNDD2Q9BQY9 259 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 RPAP1Q9BWH6 1393 aaPredicted RBP20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 SLC27A2O14975 620 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 LARGE1O95461 756 aa20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 RBM27Q9P2N5 1060 aaKnown RBP20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 NSFL1CQ9UNZ2 370 aaKnown RBP20.35■□□□□ 0.85
DNMT3A-205ENST00000402667 CCDC191Q8NCU4 936 aa20.34■□□□□ 0.85
DNMT3A-205ENST00000402667 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
DNMT3A-205ENST00000402667 ZNF589Q86UQ0 364 aaPredicted RBP20.33■□□□□ 0.85
DNMT3A-205ENST00000402667 ZSCAN31Q96LW9 406 aaPredicted RBP20.33■□□□□ 0.84
DNMT3A-205ENST00000402667 NDUFB9Q9Y6M9 179 aa20.33■□□□□ 0.84
DNMT3A-205ENST00000402667 ATG9AQ7Z3C6 839 aa20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 MBD3O95983 291 aa20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 FOXD4L6Q3SYB3 417 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 FOXD4L3Q6VB84 417 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 TMEM63CQ9P1W3 806 aa20.32■□□□□ 0.84
DNMT3A-205ENST00000402667 TAF5LO75529 589 aa20.31■□□□□ 0.84
DNMT3A-205ENST00000402667 PSMA5P28066 241 aa20.31■□□□□ 0.84
DNMT3A-205ENST00000402667 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
DNMT3A-205ENST00000402667 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
DNMT3A-205ENST00000402667 HAUS7Q99871 368 aa20.31■□□□□ 0.84
DNMT3A-205ENST00000402667 SH2B1Q9NRF2 756 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms