RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 KLHDC4Q8TBB5 520 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 GPATCH3Q96I76 525 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 UBAP1LF5GYI3 381 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 CD2BP2O95400 341 aaKnown RBP14.97□□□□□ -0.01
CLIP4-203ENST00000401617 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
CLIP4-203ENST00000401617 MAP3K15Q6ZN16 1313 aa14.97□□□□□ -0.01
CLIP4-203ENST00000401617 NUP98P52948 1817 aa14.96□□□□□ -0.01
CLIP4-203ENST00000401617 DDIT3P35638 169 aa14.96□□□□□ -0.01
CLIP4-203ENST00000401617 SIL1Q9H173 461 aa14.96□□□□□ -0.01
CLIP4-203ENST00000401617 JCADQ9P266 1359 aa14.96□□□□□ -0.01
CLIP4-203ENST00000401617 RREB1Q92766 1687 aa14.96□□□□□ -0.02
CLIP4-203ENST00000401617 KIF6Q6ZMV9 814 aa14.95□□□□□ -0.02
CLIP4-203ENST00000401617 GIGYF2Q6Y7W6 1299 aaKnown RBP14.95□□□□□ -0.02
CLIP4-203ENST00000401617 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
CLIP4-203ENST00000401617 K7ELQ4 463 aaPredicted RBP14.94□□□□□ -0.02
CLIP4-203ENST00000401617 SGSM2O43147 1006 aa14.94□□□□□ -0.02
CLIP4-203ENST00000401617 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
CLIP4-203ENST00000401617 RTL5Q5HYW3 569 aaPredicted RBP14.94□□□□□ -0.02
CLIP4-203ENST00000401617 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
CLIP4-203ENST00000401617 ANAPC15P60006 121 aa14.94□□□□□ -0.02
CLIP4-203ENST00000401617 VPS72Q15906 364 aa14.94□□□□□ -0.02
CLIP4-203ENST00000401617 SYTL4Q96C24 671 aaPredicted RBP14.94□□□□□ -0.02
CLIP4-203ENST00000401617 IL25Q9H293 177 aa14.94□□□□□ -0.02
CLIP4-203ENST00000401617 PCCAP05165 728 aaPredicted RBP14.93□□□□□ -0.02
CLIP4-203ENST00000401617 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
CLIP4-203ENST00000401617 EVI5LQ96CN4 794 aa14.93□□□□□ -0.02
CLIP4-203ENST00000401617 CCDC8Q9H0W5 538 aaPredicted RBP14.93□□□□□ -0.02
CLIP4-203ENST00000401617 TLR7Q9NYK1 1049 aaKnown RBP14.93□□□□□ -0.02
CLIP4-203ENST00000401617 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
CLIP4-203ENST00000401617 TNNI3KQ59H18 835 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 FNBP4Q8N3X1 1017 aaPredicted RBP14.92□□□□□ -0.02
CLIP4-203ENST00000401617 CHMP5Q9NZZ3 219 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 ZBTB1Q9Y2K1 713 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 FPGT-TNNI3KV9GXZ4 949 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 ERVV-1B6SEH8 477 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 TFCP2Q12800 502 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 HSP90AB3PQ58FF7 597 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 ATG9AQ7Z3C6 839 aa14.92□□□□□ -0.02
CLIP4-203ENST00000401617 MYH14Q7Z406 1995 aaKnown RBP14.92□□□□□ -0.02
CLIP4-203ENST00000401617 MYH3P11055 1940 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 ZBTB38Q8NAP3 1195 aaPredicted RBP14.91□□□□□ -0.02
CLIP4-203ENST00000401617 GPR108Q9NPR9 543 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 CDHR2Q9BYE9 1310 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 MCCP23508 829 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 HLFQ16534 295 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 SPRYD3Q8NCJ5 442 aa14.91□□□□□ -0.02
CLIP4-203ENST00000401617 DBNLQ9UJU6 430 aaKnown RBP14.91□□□□□ -0.02
CLIP4-203ENST00000401617 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
CLIP4-203ENST00000401617 CIAO1O76071 339 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 CSF1RP07333 972 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 ATP5JP18859 108 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 EIF5P55010 431 aaKnown RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 INTS5Q6P9B9 1019 aaKnown RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 NLRP10Q86W26 655 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 IL27Q8NEV9 243 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 LSG1Q9H089 658 aaKnown RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 FRAT2O75474 233 aaPredicted RBP14.9□□□□□ -0.02
CLIP4-203ENST00000401617 HSPA4P34932 840 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 ACSBG1Q96GR2 724 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 FBXO3Q9UK99 471 aa14.9□□□□□ -0.02
CLIP4-203ENST00000401617 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 RAD50Q92878 1312 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 EYA2O00167 538 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 IL15P40933 162 aaPredicted RBP14.89□□□□□ -0.03
CLIP4-203ENST00000401617 RUFY2Q8WXA3 655 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 NGLY1Q96IV0 654 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 PALD1Q9ULE6 856 aa14.89□□□□□ -0.03
CLIP4-203ENST00000401617 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
CLIP4-203ENST00000401617 LOC102724428A0A0B4J2F2 783 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 HIP1O00291 1037 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 SIK1P57059 783 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 ST18O60284 1047 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
CLIP4-203ENST00000401617 FAM89AQ96GI7 184 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 DIAPH3Q9NSV4 1193 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
CLIP4-203ENST00000401617 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 FAM98CQ17RN3 349 aaKnown RBP14.87□□□□□ -0.03
CLIP4-203ENST00000401617 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
CLIP4-203ENST00000401617 DZIP3Q86Y13 1208 aaKnown RBP14.87□□□□□ -0.03
CLIP4-203ENST00000401617 ZNF34Q8IZ26 560 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 C8orf37Q96NL8 207 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 PALLDQ8WX93 1383 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 ITPK1Q13572 414 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 DBNDD2Q9BQY9 259 aa14.87□□□□□ -0.03
CLIP4-203ENST00000401617 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
CLIP4-203ENST00000401617 LRRC24Q50LG9 513 aa14.86□□□□□ -0.03
CLIP4-203ENST00000401617 RFX7Q2KHR2 1363 aa14.86□□□□□ -0.03
CLIP4-203ENST00000401617 KCNB2Q92953 911 aa14.85□□□□□ -0.03
CLIP4-203ENST00000401617 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
CLIP4-203ENST00000401617 ZNF609O15014 1411 aa14.85□□□□□ -0.03
CLIP4-203ENST00000401617 KCNQ2O43526 872 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms