RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
TNRC18-202ENST00000399434 CWC25Q9NXE8 425 aaPredicted RBP20.37■□□□□ 0.85
TNRC18-202ENST00000399434 SSFA2P28290 1259 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 BAG6P46379 1132 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 C9orf78Q9NZ63 289 aaPredicted RBP20.37■□□□□ 0.85
TNRC18-202ENST00000399434 MYH3P11055 1940 aa20.36■□□□□ 0.85
TNRC18-202ENST00000399434 H7C1W4 665 aa20.36■□□□□ 0.85
TNRC18-202ENST00000399434 RGL2O15211 777 aa20.36■□□□□ 0.85
TNRC18-202ENST00000399434 ANKRD44Q8N8A2 993 aa20.36■□□□□ 0.85
TNRC18-202ENST00000399434 HDAC1Q13547 482 aaPredicted RBP20.35■□□□□ 0.85
TNRC18-202ENST00000399434 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
TNRC18-202ENST00000399434 UBE3BQ7Z3V4 1068 aa20.35■□□□□ 0.85
TNRC18-202ENST00000399434 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
TNRC18-202ENST00000399434 EPHA10Q5JZY3 1008 aa20.33■□□□□ 0.85
TNRC18-202ENST00000399434 CLEC4GQ6UXB4 293 aa20.33■□□□□ 0.85
TNRC18-202ENST00000399434 TBC1D9BQ66K14 1250 aa20.32■□□□□ 0.84
TNRC18-202ENST00000399434 ZNF652Q9Y2D9 606 aa20.32■□□□□ 0.84
TNRC18-202ENST00000399434 PNPLA7Q6ZV29 1317 aa20.32■□□□□ 0.84
TNRC18-202ENST00000399434 PNMA6EA0A0J9YXQ4 647 aa20.31■□□□□ 0.84
TNRC18-202ENST00000399434 PCCAP05165 728 aaPredicted RBP20.31■□□□□ 0.84
TNRC18-202ENST00000399434 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
TNRC18-202ENST00000399434 RFC4P35249 363 aa20.31■□□□□ 0.84
TNRC18-202ENST00000399434 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
TNRC18-202ENST00000399434 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
TNRC18-202ENST00000399434 ZPR1O75312 459 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 NTSR2O95665 410 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 COL23A1Q86Y22 540 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 TFCP2L1Q9NZI6 479 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 TNRC6CQ9HCJ0 1690 aaKnown RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 GYS1P13807 737 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 MTX1Q13505 466 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 ZBTB38Q8NAP3 1195 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 RWDD1Q9H446 243 aaPredicted RBP20.3■□□□□ 0.84
TNRC18-202ENST00000399434 CDHR2Q9BYE9 1310 aa20.3■□□□□ 0.84
TNRC18-202ENST00000399434 FOXO4P98177 505 aa20.29■□□□□ 0.84
TNRC18-202ENST00000399434 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
TNRC18-202ENST00000399434 PARP10Q53GL7 1025 aa20.29■□□□□ 0.84
TNRC18-202ENST00000399434 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
TNRC18-202ENST00000399434 NRXN2Q9P2S2 1712 aa20.29■□□□□ 0.84
TNRC18-202ENST00000399434 POLA2Q14181 598 aa20.28■□□□□ 0.84
TNRC18-202ENST00000399434 SLC15A2Q16348 729 aa20.28■□□□□ 0.84
TNRC18-202ENST00000399434 RABL6Q3YEC7 729 aaPredicted RBP20.28■□□□□ 0.84
TNRC18-202ENST00000399434 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
TNRC18-202ENST00000399434 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
TNRC18-202ENST00000399434 SSH3Q8TE77 659 aa20.27■□□□□ 0.84
TNRC18-202ENST00000399434 SOCS7O14512 581 aa20.26■□□□□ 0.83
TNRC18-202ENST00000399434 NFIXQ14938 502 aa20.26■□□□□ 0.83
TNRC18-202ENST00000399434 BICDL1Q6ZP65 573 aa20.26■□□□□ 0.83
TNRC18-202ENST00000399434 PLA2G12BQ9BX93 195 aa20.26■□□□□ 0.83
TNRC18-202ENST00000399434 TRMT112Q9UI30 125 aaKnown RBP20.26■□□□□ 0.83
TNRC18-202ENST00000399434 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 UTP14AQ9BVJ6 771 aaKnown RBP20.25■□□□□ 0.83
TNRC18-202ENST00000399434 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 LRP5O75197 1615 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 COL4A1P02462 1669 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
TNRC18-202ENST00000399434 SKAP1Q86WV1 359 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 HDAC5Q9UQL6 1122 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 DCTPP1Q9H773 170 aa20.24■□□□□ 0.83
TNRC18-202ENST00000399434 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
TNRC18-202ENST00000399434 RFX5P48382 616 aaPredicted RBP20.23■□□□□ 0.83
TNRC18-202ENST00000399434 ANKRD31Q8N7Z5 1873 aa20.23■□□□□ 0.83
TNRC18-202ENST00000399434 SPEF2Q9C093 1822 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 HMMRO75330 724 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 TM4SF1P30408 202 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 DDR1Q08345 913 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 LMBR1LQ6UX01 489 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 SETDB2Q96T68 719 aa20.22■□□□□ 0.83
TNRC18-202ENST00000399434 ERFEQ4G0M1 354 aa20.21■□□□□ 0.83
TNRC18-202ENST00000399434 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
TNRC18-202ENST00000399434 PDGFDQ9GZP0 370 aaPredicted RBP20.2■□□□□ 0.82
TNRC18-202ENST00000399434 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
TNRC18-202ENST00000399434 CSF1RP07333 972 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 CTSWP56202 376 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
TNRC18-202ENST00000399434 EXOC6BQ9Y2D4 811 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 TAF1P21675 1872 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 RIC1Q4ADV7 1423 aa20.19■□□□□ 0.82
TNRC18-202ENST00000399434 MSH5O43196 834 aa20.18■□□□□ 0.82
TNRC18-202ENST00000399434 FAM161AQ3B820 660 aa20.18■□□□□ 0.82
TNRC18-202ENST00000399434 KLHDC4Q8TBB5 520 aa20.18■□□□□ 0.82
TNRC18-202ENST00000399434 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
TNRC18-202ENST00000399434 POLRMTO00411 1230 aaKnown RBP20.18■□□□□ 0.82
TNRC18-202ENST00000399434 PDE8AO60658 829 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms