RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
COL25A1-201ENST00000399126 OSBPL3Q9H4L5 887 aa18.63■□□□□ 0.57
COL25A1-201ENST00000399126 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
COL25A1-201ENST00000399126 C22orf23Q9BZE7 217 aa18.63■□□□□ 0.57
COL25A1-201ENST00000399126 SIL1Q9H173 461 aa18.63■□□□□ 0.57
COL25A1-201ENST00000399126 SPATA31A6Q5VVP1 1343 aa18.63■□□□□ 0.57
COL25A1-201ENST00000399126 RAB11FIP3O75154 756 aa18.62■□□□□ 0.57
COL25A1-201ENST00000399126 CDC45O75419 566 aa18.62■□□□□ 0.57
COL25A1-201ENST00000399126 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
COL25A1-201ENST00000399126 PTF1AQ7RTS3 328 aa18.62■□□□□ 0.57
COL25A1-201ENST00000399126 KIF1BPQ96EK5 621 aa18.62■□□□□ 0.57
COL25A1-201ENST00000399126 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
COL25A1-201ENST00000399126 CWC25Q9NXE8 425 aaPredicted RBP18.6■□□□□ 0.57
COL25A1-201ENST00000399126 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
COL25A1-201ENST00000399126 HLFQ16534 295 aa18.6■□□□□ 0.57
COL25A1-201ENST00000399126 NAP1L5Q96NT1 182 aaPredicted RBP18.6■□□□□ 0.57
COL25A1-201ENST00000399126 H7C1W4 665 aa18.59■□□□□ 0.57
COL25A1-201ENST00000399126 SASH1O94885 1247 aa18.59■□□□□ 0.57
COL25A1-201ENST00000399126 MEX3CQ5U5Q3 659 aaKnown RBP18.59■□□□□ 0.57
COL25A1-201ENST00000399126 STAP2Q9UGK3 403 aa18.58■□□□□ 0.57
COL25A1-201ENST00000399126 MYH14Q7Z406 1995 aaKnown RBP18.58■□□□□ 0.57
COL25A1-201ENST00000399126 ATP6V1AP38606 617 aa18.58■□□□□ 0.56
COL25A1-201ENST00000399126 ITPK1Q13572 414 aa18.58■□□□□ 0.56
COL25A1-201ENST00000399126 KIF6Q6ZMV9 814 aa18.58■□□□□ 0.56
COL25A1-201ENST00000399126 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 MAP4K4O95819 1239 aaPredicted RBP18.57■□□□□ 0.56
COL25A1-201ENST00000399126 SIK1P57059 783 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
COL25A1-201ENST00000399126 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 RFX5P48382 616 aaPredicted RBP18.57■□□□□ 0.56
COL25A1-201ENST00000399126 KCNQ4P56696 695 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 FOXO4P98177 505 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 LMBR1LQ6UX01 489 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 ISCA1Q9BUE6 129 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 GPTP24298 496 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
COL25A1-201ENST00000399126 AFF2P51816 1311 aa18.56■□□□□ 0.56
COL25A1-201ENST00000399126 PI4K2BQ8TCG2 481 aa18.56■□□□□ 0.56
COL25A1-201ENST00000399126 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
COL25A1-201ENST00000399126 CHMP3Q9Y3E7 222 aa18.56■□□□□ 0.56
COL25A1-201ENST00000399126 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
COL25A1-201ENST00000399126 G3BP1Q13283 466 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL25A1-201ENST00000399126 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
COL25A1-201ENST00000399126 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
COL25A1-201ENST00000399126 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
COL25A1-201ENST00000399126 NUP98P52948 1817 aa18.55■□□□□ 0.56
COL25A1-201ENST00000399126 THSD7AQ9UPZ6 1657 aa18.54■□□□□ 0.56
COL25A1-201ENST00000399126 CRKLP46109 303 aaKnown RBP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 CLASRPQ8N2M8 674 aaKnown RBP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 TLR7Q9NYK1 1049 aaKnown RBP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 COL15A1P39059 1388 aa18.54■□□□□ 0.56
COL25A1-201ENST00000399126 GIGYF2Q6Y7W6 1299 aaKnown RBP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 AACSQ86V21 672 aa18.54■□□□□ 0.56
COL25A1-201ENST00000399126 EAF2Q96CJ1 260 aaPredicted RBP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 FAM89AQ96GI7 184 aa18.54■□□□□ 0.56
COL25A1-201ENST00000399126 BCCIPQ9P287 314 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL25A1-201ENST00000399126 AK9Q5TCS8 1911 aa18.53■□□□□ 0.56
COL25A1-201ENST00000399126 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
COL25A1-201ENST00000399126 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
COL25A1-201ENST00000399126 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
COL25A1-201ENST00000399126 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
COL25A1-201ENST00000399126 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
COL25A1-201ENST00000399126 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
COL25A1-201ENST00000399126 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
COL25A1-201ENST00000399126 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.55
COL25A1-201ENST00000399126 CCDC87Q9NVE4 849 aa18.52■□□□□ 0.55
COL25A1-201ENST00000399126 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
COL25A1-201ENST00000399126 ANKRD36CQ5JPF3 1778 aa18.51■□□□□ 0.55
COL25A1-201ENST00000399126 ZNF594Q96JF6 807 aaPredicted RBP18.51■□□□□ 0.55
COL25A1-201ENST00000399126 KIF2CQ99661 725 aa18.51■□□□□ 0.55
COL25A1-201ENST00000399126 AOX1Q06278 1338 aa18.51■□□□□ 0.55
COL25A1-201ENST00000399126 IFIT2P09913 472 aaKnown RBP18.5■□□□□ 0.55
COL25A1-201ENST00000399126 TRIM28Q13263 835 aaKnown RBP18.5■□□□□ 0.55
COL25A1-201ENST00000399126 SMIM5Q71RC9 77 aa18.5■□□□□ 0.55
COL25A1-201ENST00000399126 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
COL25A1-201ENST00000399126 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
COL25A1-201ENST00000399126 TFCP2Q12800 502 aa18.49■□□□□ 0.55
COL25A1-201ENST00000399126 IL25Q9H293 177 aa18.49■□□□□ 0.55
COL25A1-201ENST00000399126 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
COL25A1-201ENST00000399126 BTAF1O14981 1849 aa18.49■□□□□ 0.55
COL25A1-201ENST00000399126 COL5A3P25940 1745 aaPredicted RBP18.49■□□□□ 0.55
COL25A1-201ENST00000399126 LINC00116Q8NCU8 138 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 USP42Q9H9J4 1324 aaKnown RBP18.48■□□□□ 0.55
COL25A1-201ENST00000399126 CHMLP26374 656 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 USP26Q9BXU7 913 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 RREB1Q92766 1687 aa18.48■□□□□ 0.55
COL25A1-201ENST00000399126 PCCAP05165 728 aaPredicted RBP18.47■□□□□ 0.55
COL25A1-201ENST00000399126 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
COL25A1-201ENST00000399126 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
COL25A1-201ENST00000399126 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
COL25A1-201ENST00000399126 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
COL25A1-201ENST00000399126 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
COL25A1-201ENST00000399126 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
COL25A1-201ENST00000399126 CICQ96RK0 1608 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms