RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 ENOX2Q16206 610 aaKnown RBP16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 NAPBQ9H115 298 aa16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 LUC7LQ9NQ29 371 aaKnown RBP16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
PCDHA11-201ENST00000398640 UBA5Q9GZZ9 404 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 TSPYL1Q9H0U9 437 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 CUL5Q93034 780 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 CAMK4Q16566 473 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 LDHCP07864 332 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 SPTY2D1Q68D10 685 aaPredicted RBP16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 KIF1BPQ96EK5 621 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 DESP17661 470 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
PCDHA11-201ENST00000398640 FAM193AP78312 1265 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 TAX1BP1Q86VP1 789 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 GOLGA6L10A6NI86 522 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
PCDHA11-201ENST00000398640 OGFOD1Q8N543 542 aa16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 CCDC8Q9H0W5 538 aaPredicted RBP16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 CCDC87Q9NVE4 849 aa16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 NF2P35240 595 aa16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 F8W031 263 aaPredicted RBP16.6■□□□□ 0.25
PCDHA11-201ENST00000398640 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 PI4KAP2A4QPH2 592 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 ANXA1P04083 346 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 PI4KAP1Q8N8J0 262 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 WASF1Q92558 559 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 MBD5Q9P267 1494 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 CNBD1Q8NA66 436 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 EYA3Q99504 573 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
PCDHA11-201ENST00000398640 KRT32Q14532 448 aa16.58■□□□□ 0.25
PCDHA11-201ENST00000398640 CBFA2T2O43439 604 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 LARP6Q9BRS8 491 aaKnown RBP16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 GSTO1P78417 241 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.24
PCDHA11-201ENST00000398640 UPF3BQ9BZI7 483 aaKnown RBP16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 NUP62CLQ9H1M0 184 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 ADCY10Q96PN6 1610 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 BAG3O95817 575 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 ZRSR2Q15696 482 aaKnown RBP16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 GPR162Q16538 588 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 GUCY1B3Q02153 619 aa16.57■□□□□ 0.24
PCDHA11-201ENST00000398640 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 RBM26Q5T8P6 1007 aaKnown RBP16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 KIAA1328Q86T90 577 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 IL16Q14005 1332 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 DRC1Q96MC2 740 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
PCDHA11-201ENST00000398640 FAM196AQ6ZSG2 479 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 ZC3H12CQ9C0D7 883 aaKnown RBP16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 CTCFLQ8NI51 663 aaPredicted RBP16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 CWC15Q9P013 229 aaKnown RBP16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 H0YIN7 160 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 MX1P20591 662 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 BACH2Q9BYV9 841 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 LEKR1Q6ZMV7 388 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 TXLNBQ8N3L3 684 aa16.55■□□□□ 0.24
PCDHA11-201ENST00000398640 TTF1Q15361 905 aaPredicted RBP16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 KLHL10Q6JEL2 608 aa16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 METP08581 1390 aa16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
PCDHA11-201ENST00000398640 IQCA1Q86XH1 822 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 DNAI2Q9GZS0 605 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 EHMT1Q9H9B1 1298 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms