RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
KRT40-202ENST00000398486 RGL2O15211 777 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 CEP85Q6P2H3 762 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
KRT40-202ENST00000398486 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
KRT40-202ENST00000398486 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
KRT40-202ENST00000398486 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
KRT40-202ENST00000398486 IGHDP01880 384 aa16.3■□□□□ 0.2
KRT40-202ENST00000398486 GNAI2P04899 355 aa16.3■□□□□ 0.2
KRT40-202ENST00000398486 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
KRT40-202ENST00000398486 SUCLG2Q96I99 432 aa16.3■□□□□ 0.2
KRT40-202ENST00000398486 TFCP2L1Q9NZI6 479 aa16.3■□□□□ 0.2
KRT40-202ENST00000398486 H7C1W4 665 aa16.29■□□□□ 0.2
KRT40-202ENST00000398486 RFC4P35249 363 aa16.29■□□□□ 0.2
KRT40-202ENST00000398486 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
KRT40-202ENST00000398486 ZPR1O75312 459 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 GYS1P13807 737 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
KRT40-202ENST00000398486 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 ILDR2Q71H61 639 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
KRT40-202ENST00000398486 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
KRT40-202ENST00000398486 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
KRT40-202ENST00000398486 ANKRD44Q8N8A2 993 aa16.28■□□□□ 0.2
KRT40-202ENST00000398486 NTSR2O95665 410 aa16.27■□□□□ 0.2
KRT40-202ENST00000398486 HDAC1Q13547 482 aaPredicted RBP16.27■□□□□ 0.2
KRT40-202ENST00000398486 SUSD4Q5VX71 490 aa16.27■□□□□ 0.2
KRT40-202ENST00000398486 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
KRT40-202ENST00000398486 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
KRT40-202ENST00000398486 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
KRT40-202ENST00000398486 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
KRT40-202ENST00000398486 BICC1Q9H694 974 aaKnown RBP16.26■□□□□ 0.19
KRT40-202ENST00000398486 TNRC6CQ9HCJ0 1690 aaKnown RBP16.26■□□□□ 0.19
KRT40-202ENST00000398486 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
KRT40-202ENST00000398486 MTX1Q13505 466 aa16.25■□□□□ 0.19
KRT40-202ENST00000398486 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
KRT40-202ENST00000398486 BICDL1Q6ZP65 573 aa16.25■□□□□ 0.19
KRT40-202ENST00000398486 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
KRT40-202ENST00000398486 NFIXQ14938 502 aa16.24■□□□□ 0.19
KRT40-202ENST00000398486 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
KRT40-202ENST00000398486 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
KRT40-202ENST00000398486 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
KRT40-202ENST00000398486 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
KRT40-202ENST00000398486 GOLGB1Q14789 3259 aaKnown RBP16.24■□□□□ 0.19
KRT40-202ENST00000398486 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
KRT40-202ENST00000398486 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 FOXO4P98177 505 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
KRT40-202ENST00000398486 ATP8B2P98198 1209 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 FLAD1Q8NFF5 587 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
KRT40-202ENST00000398486 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
KRT40-202ENST00000398486 SRCAPQ6ZRS2 3230 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 COL4A1P02462 1669 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 POLA2Q14181 598 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 SSH3Q8TE77 659 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
KRT40-202ENST00000398486 TM4SF1P30408 202 aa16.21■□□□□ 0.19
KRT40-202ENST00000398486 DDR1Q08345 913 aa16.21■□□□□ 0.19
KRT40-202ENST00000398486 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
KRT40-202ENST00000398486 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
KRT40-202ENST00000398486 RWDD1Q9H446 243 aaPredicted RBP16.21■□□□□ 0.19
KRT40-202ENST00000398486 IRS4O14654 1257 aaPredicted RBP16.21■□□□□ 0.18
KRT40-202ENST00000398486 SRGAP3O43295 1099 aa16.21■□□□□ 0.18
KRT40-202ENST00000398486 LRP5O75197 1615 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 TAF1P21675 1872 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 MSH5O43196 834 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
KRT40-202ENST00000398486 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 SMC5Q8IY18 1101 aa16.2■□□□□ 0.18
KRT40-202ENST00000398486 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
KRT40-202ENST00000398486 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
KRT40-202ENST00000398486 SKAP1Q86WV1 359 aa16.19■□□□□ 0.18
KRT40-202ENST00000398486 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
KRT40-202ENST00000398486 RFX5P48382 616 aaPredicted RBP16.18■□□□□ 0.18
KRT40-202ENST00000398486 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 NBPF5PQ86XG9 351 aaPredicted RBP16.18■□□□□ 0.18
KRT40-202ENST00000398486 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 CSF1RP07333 972 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 CTSWP56202 376 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
KRT40-202ENST00000398486 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 HMMRO75330 724 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
KRT40-202ENST00000398486 TTLL11Q8NHH1 800 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms