RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
VPREB3-202ENST00000398465 SUSD4Q5VX71 490 aa16.45■□□□□ 0.22
VPREB3-202ENST00000398465 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
VPREB3-202ENST00000398465 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
VPREB3-202ENST00000398465 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
VPREB3-202ENST00000398465 LRRC37AA6NMS7 1700 aa16.45■□□□□ 0.22
VPREB3-202ENST00000398465 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
VPREB3-202ENST00000398465 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
VPREB3-202ENST00000398465 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
VPREB3-202ENST00000398465 ZNF784Q8NCA9 323 aaPredicted RBP16.44■□□□□ 0.22
VPREB3-202ENST00000398465 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
VPREB3-202ENST00000398465 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
VPREB3-202ENST00000398465 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
VPREB3-202ENST00000398465 SOGA3Q5TF21 947 aa16.43■□□□□ 0.22
VPREB3-202ENST00000398465 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
VPREB3-202ENST00000398465 ARHGAP27Q6ZUM4 889 aa16.43■□□□□ 0.22
VPREB3-202ENST00000398465 ISCA1Q9BUE6 129 aa16.42■□□□□ 0.22
VPREB3-202ENST00000398465 PHAXQ9H814 394 aaKnown RBP16.42■□□□□ 0.22
VPREB3-202ENST00000398465 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
VPREB3-202ENST00000398465 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
VPREB3-202ENST00000398465 TRIM28Q13263 835 aaKnown RBP16.41■□□□□ 0.22
VPREB3-202ENST00000398465 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
VPREB3-202ENST00000398465 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
VPREB3-202ENST00000398465 ZC3H4Q9UPT8 1303 aaKnown RBP16.41■□□□□ 0.22
VPREB3-202ENST00000398465 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
VPREB3-202ENST00000398465 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
VPREB3-202ENST00000398465 SLC10A5Q5PT55 438 aa16.4■□□□□ 0.22
VPREB3-202ENST00000398465 E9PSI1 815 aa16.39■□□□□ 0.21
VPREB3-202ENST00000398465 VAMP4O75379 141 aa16.39■□□□□ 0.21
VPREB3-202ENST00000398465 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
VPREB3-202ENST00000398465 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
VPREB3-202ENST00000398465 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
VPREB3-202ENST00000398465 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
VPREB3-202ENST00000398465 TAF1P21675 1872 aa16.38■□□□□ 0.21
VPREB3-202ENST00000398465 NFKBIEO00221 500 aa16.38■□□□□ 0.21
VPREB3-202ENST00000398465 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
VPREB3-202ENST00000398465 C21orf2O43822 256 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 RASSF7Q02833 373 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 FLIIQ13045 1269 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 C7orf43Q8WVR3 580 aa16.37■□□□□ 0.21
VPREB3-202ENST00000398465 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
VPREB3-202ENST00000398465 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 LMNB1P20700 586 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 MIER1Q8N108 512 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
VPREB3-202ENST00000398465 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 MYD88Q99836 296 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 TAOK3Q9H2K8 898 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 MAP3K2Q9Y2U5 619 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
VPREB3-202ENST00000398465 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
VPREB3-202ENST00000398465 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
VPREB3-202ENST00000398465 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
VPREB3-202ENST00000398465 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
VPREB3-202ENST00000398465 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
VPREB3-202ENST00000398465 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
VPREB3-202ENST00000398465 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
VPREB3-202ENST00000398465 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
VPREB3-202ENST00000398465 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
VPREB3-202ENST00000398465 ZBTB38Q8NAP3 1195 aaPredicted RBP16.34■□□□□ 0.21
VPREB3-202ENST00000398465 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
VPREB3-202ENST00000398465 WDR90Q96KV7 1748 aa16.33■□□□□ 0.21
VPREB3-202ENST00000398465 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
VPREB3-202ENST00000398465 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
VPREB3-202ENST00000398465 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
VPREB3-202ENST00000398465 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
VPREB3-202ENST00000398465 G2E3Q7L622 706 aa16.33■□□□□ 0.2
VPREB3-202ENST00000398465 ZNF428Q96B54 188 aa16.33■□□□□ 0.2
VPREB3-202ENST00000398465 GPBP1L1Q9HC44 474 aaPredicted RBP16.33■□□□□ 0.2
VPREB3-202ENST00000398465 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
VPREB3-202ENST00000398465 ABCC4O15439 1325 aa16.33■□□□□ 0.2
VPREB3-202ENST00000398465 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
VPREB3-202ENST00000398465 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
VPREB3-202ENST00000398465 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
VPREB3-202ENST00000398465 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
VPREB3-202ENST00000398465 DUOX1Q9NRD9 1551 aa16.32■□□□□ 0.2
VPREB3-202ENST00000398465 COL4A1P02462 1669 aa16.31■□□□□ 0.2
VPREB3-202ENST00000398465 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
VPREB3-202ENST00000398465 PRELPP51888 382 aa16.31■□□□□ 0.2
VPREB3-202ENST00000398465 FKBP4Q02790 459 aaKnown RBP eCLIP16.31■□□□□ 0.2
VPREB3-202ENST00000398465 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
VPREB3-202ENST00000398465 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
VPREB3-202ENST00000398465 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
VPREB3-202ENST00000398465 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
VPREB3-202ENST00000398465 NEURL1BA8MQ27 555 aa16.3■□□□□ 0.2
VPREB3-202ENST00000398465 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
VPREB3-202ENST00000398465 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
VPREB3-202ENST00000398465 GRAPQ13588 217 aa16.3■□□□□ 0.2
VPREB3-202ENST00000398465 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
VPREB3-202ENST00000398465 TMC4Q7Z404 712 aa16.3■□□□□ 0.2
VPREB3-202ENST00000398465 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
VPREB3-202ENST00000398465 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
VPREB3-202ENST00000398465 PSMD1Q99460 953 aa16.3■□□□□ 0.2
VPREB3-202ENST00000398465 SCN4AP35499 1836 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms