RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TUBGCP6Q96RT7 1819 aa24.29■■□□□ 1.48
PDLIM2-205ENST00000397761 CLEC4GQ6UXB4 293 aa24.29■■□□□ 1.48
PDLIM2-205ENST00000397761 GNPATO15228 680 aa24.28■■□□□ 1.48
PDLIM2-205ENST00000397761 TXNRD1Q16881 649 aa24.28■■□□□ 1.48
PDLIM2-205ENST00000397761 RABL6Q3YEC7 729 aaPredicted RBP24.28■■□□□ 1.48
PDLIM2-205ENST00000397761 NLRP10Q86W26 655 aa24.28■■□□□ 1.48
PDLIM2-205ENST00000397761 ARXQ96QS3 562 aa24.28■■□□□ 1.48
PDLIM2-205ENST00000397761 BICC1Q9H694 974 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-205ENST00000397761 RTCBQ9Y3I0 505 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-205ENST00000397761 PCCAP05165 728 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 SKAP1Q86WV1 359 aa24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 NARFQ9UHQ1 456 aa24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 SRGAP3O43295 1099 aa24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 APBA3O96018 575 aa24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 EPHA10Q5JZY3 1008 aa24.26■■□□□ 1.47
PDLIM2-205ENST00000397761 UBN2Q6ZU65 1347 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 CDHR2Q9BYE9 1310 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 CASZ1Q86V15 1759 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 ADRA2BP18089 450 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 ZBTB38Q8NAP3 1195 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 ZNF652Q9Y2D9 606 aa24.25■■□□□ 1.47
PDLIM2-205ENST00000397761 CHD1LQ86WJ1 897 aa24.24■■□□□ 1.47
PDLIM2-205ENST00000397761 AK7Q96M32 723 aa24.24■■□□□ 1.47
PDLIM2-205ENST00000397761 PLA2G12BQ9BX93 195 aa24.24■■□□□ 1.47
PDLIM2-205ENST00000397761 GPTP24298 496 aa24.23■■□□□ 1.47
PDLIM2-205ENST00000397761 NOP58Q9Y2X3 529 aaKnown RBP24.23■■□□□ 1.47
PDLIM2-205ENST00000397761 FOXO4P98177 505 aa24.22■■□□□ 1.47
PDLIM2-205ENST00000397761 SF3B2Q13435 895 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-205ENST00000397761 PARP10Q53GL7 1025 aa24.22■■□□□ 1.47
PDLIM2-205ENST00000397761 JARID2Q92833 1246 aaPredicted RBP24.22■■□□□ 1.47
PDLIM2-205ENST00000397761 BCL2L12Q9HB09 334 aa24.22■■□□□ 1.47
PDLIM2-205ENST00000397761 QSER1Q2KHR3 1735 aa24.21■■□□□ 1.47
PDLIM2-205ENST00000397761 ARHGEF1Q92888 912 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-205ENST00000397761 USP42Q9H9J4 1324 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-205ENST00000397761 PDE4AP27815 886 aa24.2■■□□□ 1.47
PDLIM2-205ENST00000397761 ANKRD45Q5TZF3 282 aa24.2■■□□□ 1.47
PDLIM2-205ENST00000397761 SSFA2P28290 1259 aa24.19■■□□□ 1.46
PDLIM2-205ENST00000397761 TRAPPC3LQ5T215 181 aa24.19■■□□□ 1.46
PDLIM2-205ENST00000397761 SMIM5Q71RC9 77 aa24.19■■□□□ 1.46
PDLIM2-205ENST00000397761 FAM89AQ96GI7 184 aa24.19■■□□□ 1.46
PDLIM2-205ENST00000397761 EXOC6BQ9Y2D4 811 aa24.19■■□□□ 1.46
PDLIM2-205ENST00000397761 RFX5P48382 616 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 RGS3P49796 1198 aa24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 USPL1Q5W0Q7 1092 aa24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 DEFB132Q7Z7B7 95 aa24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 LNPKQ9C0E8 428 aa24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 NIP7Q9Y221 180 aaKnown RBP eCLIP24.18■■□□□ 1.46
PDLIM2-205ENST00000397761 RAB11FIP3O75154 756 aa24.17■■□□□ 1.46
PDLIM2-205ENST00000397761 ZPR1O75312 459 aa24.17■■□□□ 1.46
PDLIM2-205ENST00000397761 SUSD4Q5VX71 490 aa24.17■■□□□ 1.46
PDLIM2-205ENST00000397761 AKT1S1Q96B36 256 aa24.17■■□□□ 1.46
PDLIM2-205ENST00000397761 TRMT112Q9UI30 125 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-205ENST00000397761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 SURF6O75683 361 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 LMBR1LQ6UX01 489 aa24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 COPRSQ9NQ92 184 aa24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 SRP68Q9UHB9 627 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-205ENST00000397761 NTSR2O95665 410 aa24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 CSF1RP07333 972 aa24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 RFC4P35249 363 aa24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 RTL5Q5HYW3 569 aaPredicted RBP24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 UTP14AQ9BVJ6 771 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 SH3TC1Q8TE82 1336 aa24.15■■□□□ 1.46
PDLIM2-205ENST00000397761 BAG6P46379 1132 aa24.14■■□□□ 1.46
PDLIM2-205ENST00000397761 CAMKK2Q96RR4 588 aa24.14■■□□□ 1.46
PDLIM2-205ENST00000397761 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
PDLIM2-205ENST00000397761 LRRCC1Q9C099 1032 aa24.13■■□□□ 1.45
PDLIM2-205ENST00000397761 IRS4O14654 1257 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-205ENST00000397761 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
PDLIM2-205ENST00000397761 TBC1D9BQ66K14 1250 aa24.13■■□□□ 1.45
PDLIM2-205ENST00000397761 PHF14O94880 888 aa24.12■■□□□ 1.45
PDLIM2-205ENST00000397761 PTPN12Q05209 780 aaKnown RBP24.12■■□□□ 1.45
PDLIM2-205ENST00000397761 PDE8AO60658 829 aa24.11■■□□□ 1.45
PDLIM2-205ENST00000397761 KIF1BPQ96EK5 621 aa24.11■■□□□ 1.45
PDLIM2-205ENST00000397761 PA2G4Q9UQ80 394 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-205ENST00000397761 SMARCA5O60264 1052 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-205ENST00000397761 ERC1Q8IUD2 1116 aa24.1■■□□□ 1.45
PDLIM2-205ENST00000397761 TTLL11Q8NHH1 800 aa24.1■■□□□ 1.45
PDLIM2-205ENST00000397761 RHPN1Q8TCX5 695 aa24.1■■□□□ 1.45
PDLIM2-205ENST00000397761 ZBTB47Q9UFB7 747 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-205ENST00000397761 HSP90B1P14625 803 aaKnown RBP24.09■■□□□ 1.45
PDLIM2-205ENST00000397761 CTSWP56202 376 aa24.09■■□□□ 1.45
PDLIM2-205ENST00000397761 LRP5O75197 1615 aa24.09■■□□□ 1.45
PDLIM2-205ENST00000397761 SALL3Q9BXA9 1300 aa24.09■■□□□ 1.45
PDLIM2-205ENST00000397761 APBB1O00213 710 aa24.08■■□□□ 1.45
PDLIM2-205ENST00000397761 PLEKHM2Q8IWE5 1019 aa24.08■■□□□ 1.45
PDLIM2-205ENST00000397761 SETDB2Q96T68 719 aa24.08■■□□□ 1.45
PDLIM2-205ENST00000397761 GYS1P13807 737 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 SLC10A5Q5PT55 438 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 FLAD1Q8NFF5 587 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 RTL9Q8NET4 1388 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 EN1Q05925 392 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 G3BP1Q13283 466 aaKnown RBP eCLIP24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 EZH2Q15910 746 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 KLHDC4Q8TBB5 520 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 NYXQ9GZU5 481 aa24.07■■□□□ 1.44
PDLIM2-205ENST00000397761 CARMIL3Q8ND23 1372 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms