RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GCKRQ14397 625 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 SLFNL1Q499Z3 407 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 RAD50Q92878 1312 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 NRKQ7Z2Y5 1582 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 IGKV5-2P06315 115 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 HOXB7P09629 217 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 CAMK4Q16566 473 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 DBNDD2Q9BQY9 259 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 A0A0D9SFI3 127 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 SYT1P21579 422 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
CPSF1P1-201ENST00000397477 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 CCDC173Q0VFZ6 552 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 LSG1Q9H089 658 aaKnown RBP12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 C3P01024 1663 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
CPSF1P1-201ENST00000397477 TMEM94Q12767 1356 aa12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 CYP27B1O15528 508 aa12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 PSMA5P28066 241 aa12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 STK11IPQ8N1F8 1099 aa12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.41
CPSF1P1-201ENST00000397477 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.42
CPSF1P1-201ENST00000397477 BRD1O95696 1058 aa12.46□□□□□ -0.42
CPSF1P1-201ENST00000397477 GUCY1B3Q02153 619 aa12.46□□□□□ -0.42
CPSF1P1-201ENST00000397477 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.42
CPSF1P1-201ENST00000397477 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.42
CPSF1P1-201ENST00000397477 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 CCDC171Q6TFL3 1326 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 APPP05067 770 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZSCAN22P10073 491 aaPredicted RBP12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 DRC7Q8IY82 874 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZNF830Q96NB3 372 aaPredicted RBP12.45□□□□□ -0.42
CPSF1P1-201ENST00000397477 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 PHF14O94880 888 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 HAND2P61296 217 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 GLIPR1L2Q4G1C9 344 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 R3HCC1Q9Y3T6 440 aaKnown RBP12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 HIP1O00291 1037 aa12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 BCL11BQ9C0K0 894 aaPredicted RBP12.44□□□□□ -0.42
CPSF1P1-201ENST00000397477 KNDC1Q76NI1 1749 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 PXDNQ92626 1479 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 ME3Q16798 604 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 SPC24Q8NBT2 197 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 ADGRL3Q9HAR2 1447 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 SLC27A2O14975 620 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 TAF6LQ9Y6J9 622 aa12.43□□□□□ -0.42
CPSF1P1-201ENST00000397477 CKAP2LQ8IYA6 745 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 KAZALD1Q96I82 304 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 DBNLQ9UJU6 430 aaKnown RBP12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 BRF1Q92994 677 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 F13A1P00488 732 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 IFIT1P09914 478 aaKnown RBP12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 CWC25Q9NXE8 425 aaPredicted RBP12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 CEP126Q9P2H0 1117 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 AOX1Q06278 1338 aa12.42□□□□□ -0.42
CPSF1P1-201ENST00000397477 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 COL9A3Q14050 684 aaPredicted RBP12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 TMOD3Q9NYL9 352 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 TPCN1Q9ULQ1 816 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 PDIA6Q15084 440 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 ARHGAP23Q9P227 1491 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 KIF13AQ9H1H9 1805 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 CUL4AQ13619 759 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
CPSF1P1-201ENST00000397477 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 JAK2O60674 1132 aa12.4□□□□□ -0.42
CPSF1P1-201ENST00000397477 ZSCAN31Q96LW9 406 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms