RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ZPR1O75312 459 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 CASP7P55210 303 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 TRAPPC3LQ5T215 181 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 UBE3BQ7Z3V4 1068 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 PPP1R42Q7Z4L9 355 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 NLRP10Q86W26 655 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 EP400Q96L91 3159 aa23.63■■□□□ 1.37
TSPAN4-204ENST00000397404 HLFQ16534 295 aa23.62■■□□□ 1.37
TSPAN4-204ENST00000397404 FLAD1Q8NFF5 587 aa23.62■■□□□ 1.37
TSPAN4-204ENST00000397404 SUCLG2Q96I99 432 aa23.62■■□□□ 1.37
TSPAN4-204ENST00000397404 LRRC4BQ9NT99 713 aa23.62■■□□□ 1.37
TSPAN4-204ENST00000397404 CHD1LQ86WJ1 897 aa23.61■■□□□ 1.37
TSPAN4-204ENST00000397404 ERC1Q8IUD2 1116 aa23.61■■□□□ 1.37
TSPAN4-204ENST00000397404 BICC1Q9H694 974 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-204ENST00000397404 PDZRN3Q9UPQ7 1066 aa23.61■■□□□ 1.37
TSPAN4-204ENST00000397404 NOP58Q9Y2X3 529 aaKnown RBP23.61■■□□□ 1.37
TSPAN4-204ENST00000397404 CCDC125Q86Z20 511 aa23.6■■□□□ 1.37
TSPAN4-204ENST00000397404 PNMA6EA0A0J9YXQ4 647 aa23.59■■□□□ 1.37
TSPAN4-204ENST00000397404 RFC4P35249 363 aa23.59■■□□□ 1.37
TSPAN4-204ENST00000397404 SF3B2Q13435 895 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-204ENST00000397404 KAZALD1Q96I82 304 aa23.58■■□□□ 1.37
TSPAN4-204ENST00000397404 NYXQ9GZU5 481 aa23.58■■□□□ 1.37
TSPAN4-204ENST00000397404 UBR3Q6ZT12 1888 aa23.58■■□□□ 1.36
TSPAN4-204ENST00000397404 ANKRD45Q5TZF3 282 aa23.57■■□□□ 1.36
TSPAN4-204ENST00000397404 UTP14AQ9BVJ6 771 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-204ENST00000397404 TRMT112Q9UI30 125 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-204ENST00000397404 FBXO3Q9UK99 471 aa23.57■■□□□ 1.36
TSPAN4-204ENST00000397404 SH3TC1Q8TE82 1336 aa23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 USP42Q9H9J4 1324 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 ARHGEF1Q92888 912 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 NIP7Q9Y221 180 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 PROM2Q8N271 834 aa23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 KIF1BPQ96EK5 621 aa23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 LRRCC1Q9C099 1032 aa23.56■■□□□ 1.36
TSPAN4-204ENST00000397404 KCNQ4P56696 695 aa23.55■■□□□ 1.36
TSPAN4-204ENST00000397404 COPRSQ9NQ92 184 aa23.55■■□□□ 1.36
TSPAN4-204ENST00000397404 UBN2Q6ZU65 1347 aa23.54■■□□□ 1.36
TSPAN4-204ENST00000397404 GPTP24298 496 aa23.54■■□□□ 1.36
TSPAN4-204ENST00000397404 BAG6P46379 1132 aa23.54■■□□□ 1.36
TSPAN4-204ENST00000397404 C4AP0C0L4 1744 aa23.53■■□□□ 1.36
TSPAN4-204ENST00000397404 PDE8AO60658 829 aa23.53■■□□□ 1.36
TSPAN4-204ENST00000397404 SURF6O75683 361 aaKnown RBP23.53■■□□□ 1.36
TSPAN4-204ENST00000397404 FOXO4P98177 505 aa23.53■■□□□ 1.36
TSPAN4-204ENST00000397404 SETDB2Q96T68 719 aa23.53■■□□□ 1.36
TSPAN4-204ENST00000397404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.52■■□□□ 1.36
TSPAN4-204ENST00000397404 CSF1RP07333 972 aa23.52■■□□□ 1.36
TSPAN4-204ENST00000397404 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
TSPAN4-204ENST00000397404 G3BP1Q13283 466 aaKnown RBP eCLIP23.51■■□□□ 1.35
TSPAN4-204ENST00000397404 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
TSPAN4-204ENST00000397404 AKT1S1Q96B36 256 aa23.51■■□□□ 1.35
TSPAN4-204ENST00000397404 FAM89AQ96GI7 184 aa23.51■■□□□ 1.35
TSPAN4-204ENST00000397404 LMBR1LQ6UX01 489 aa23.5■■□□□ 1.35
TSPAN4-204ENST00000397404 MYH3P11055 1940 aa23.5■■□□□ 1.35
TSPAN4-204ENST00000397404 COL24A1Q17RW2 1714 aa23.5■■□□□ 1.35
TSPAN4-204ENST00000397404 LAMB2P55268 1798 aa23.5■■□□□ 1.35
TSPAN4-204ENST00000397404 NTSR2O95665 410 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 CCDC57Q2TAC2 916 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 CAMKK2Q96RR4 588 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 LNPKQ9C0E8 428 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 EPHA10Q5JZY3 1008 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 SUSD4Q5VX71 490 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 TPTE2Q6XPS3 522 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 BCL2L12Q9HB09 334 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 TFCP2L1Q9NZI6 479 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 EXOC6BQ9Y2D4 811 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 RTL9Q8NET4 1388 aa23.49■■□□□ 1.35
TSPAN4-204ENST00000397404 RGS3P49796 1198 aa23.48■■□□□ 1.35
TSPAN4-204ENST00000397404 CTSWP56202 376 aa23.48■■□□□ 1.35
TSPAN4-204ENST00000397404 OS9Q13438 667 aaPredicted RBP23.48■■□□□ 1.35
TSPAN4-204ENST00000397404 CIAO1O76071 339 aa23.47■■□□□ 1.35
TSPAN4-204ENST00000397404 SLC10A5Q5PT55 438 aa23.47■■□□□ 1.35
TSPAN4-204ENST00000397404 RHPN1Q8TCX5 695 aa23.47■■□□□ 1.35
TSPAN4-204ENST00000397404 PHF14O94880 888 aa23.46■■□□□ 1.35
TSPAN4-204ENST00000397404 RFX5P48382 616 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-204ENST00000397404 PTPN12Q05209 780 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-204ENST00000397404 IFIT5Q13325 482 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-204ENST00000397404 RIC1Q4ADV7 1423 aa23.46■■□□□ 1.35
TSPAN4-204ENST00000397404 QSER1Q2KHR3 1735 aa23.45■■□□□ 1.35
TSPAN4-204ENST00000397404 EIF5BO60841 1220 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 CCDC152Q4G0S7 254 aa23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 TBC1D9BQ66K14 1250 aa23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 CLASRPQ8N2M8 674 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 OSBPL3Q9H4L5 887 aa23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 AOX1Q06278 1338 aa23.45■■□□□ 1.34
TSPAN4-204ENST00000397404 NLGN1Q8N2Q7 840 aa23.44■■□□□ 1.34
TSPAN4-204ENST00000397404 TTLL11Q8NHH1 800 aa23.44■■□□□ 1.34
TSPAN4-204ENST00000397404 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
TSPAN4-204ENST00000397404 GTF2E1P29083 439 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 IL15P40933 162 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 NBPF5PQ86XG9 351 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 SRP68Q9UHB9 627 aaKnown RBP23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 ANKRD18BA2A2Z9 1011 aa23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 GYS1P13807 737 aa23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 PDE4AP27815 886 aa23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 RTL5Q5HYW3 569 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 GPR108Q9NPR9 543 aa23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 STK32BQ9NY57 414 aa23.43■■□□□ 1.34
TSPAN4-204ENST00000397404 BMP2KLQ5H9B9 411 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms