RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 EPS15P42566 896 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 CRY2Q49AN0 593 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
SCFD1-202ENST00000396629 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
SCFD1-202ENST00000396629 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
SCFD1-202ENST00000396629 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
SCFD1-202ENST00000396629 FAM177BA6PVY3 158 aa11.34□□□□□ -0.59
SCFD1-202ENST00000396629 HLFQ16534 295 aa11.34□□□□□ -0.59
SCFD1-202ENST00000396629 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
SCFD1-202ENST00000396629 PHACTR3Q96KR7 559 aa11.34□□□□□ -0.59
SCFD1-202ENST00000396629 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.59
SCFD1-202ENST00000396629 TRAF5O00463 557 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 AOC2O75106 756 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 HOXA10P31260 410 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-202ENST00000396629 CA12O43570 354 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-202ENST00000396629 CC2D1BQ5T0F9 858 aaKnown RBP11.33□□□□□ -0.6
SCFD1-202ENST00000396629 MCOLN1Q9GZU1 580 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 ABCC12Q96J65 1359 aa11.33□□□□□ -0.6
SCFD1-202ENST00000396629 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-202ENST00000396629 GRM1Q13255 1194 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 NPC1L1Q9UHC9 1359 aa11.32□□□□□ -0.6
SCFD1-202ENST00000396629 SAPCD2Q86UD0 394 aa11.31□□□□□ -0.6
SCFD1-202ENST00000396629 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
SCFD1-202ENST00000396629 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
SCFD1-202ENST00000396629 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
SCFD1-202ENST00000396629 PGAP2Q9UHJ9 254 aa11.31□□□□□ -0.6
SCFD1-202ENST00000396629 IBTKQ9P2D0 1353 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-202ENST00000396629 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
SCFD1-202ENST00000396629 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-202ENST00000396629 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
SCFD1-202ENST00000396629 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
SCFD1-202ENST00000396629 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
SCFD1-202ENST00000396629 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
SCFD1-202ENST00000396629 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
SCFD1-202ENST00000396629 TNRC18O15417 2968 aaPredicted RBP11.3□□□□□ -0.6
SCFD1-202ENST00000396629 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
SCFD1-202ENST00000396629 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
SCFD1-202ENST00000396629 MCM10Q7L590 875 aa11.29□□□□□ -0.6
SCFD1-202ENST00000396629 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
SCFD1-202ENST00000396629 RBM17Q96I25 401 aaKnown RBP11.29□□□□□ -0.6
SCFD1-202ENST00000396629 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 HTATSF1O43719 755 aaKnown RBP11.28□□□□□ -0.6
SCFD1-202ENST00000396629 DGKZQ13574 1117 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
SCFD1-202ENST00000396629 MAP3K15Q6ZN16 1313 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 CXCL9Q07325 125 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 GLIS2Q9BZE0 524 aaPredicted RBP11.28□□□□□ -0.6
SCFD1-202ENST00000396629 UBN2Q6ZU65 1347 aa11.28□□□□□ -0.6
SCFD1-202ENST00000396629 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
SCFD1-202ENST00000396629 AOC3Q16853 763 aa11.27□□□□□ -0.61
SCFD1-202ENST00000396629 SUSD4Q5VX71 490 aa11.27□□□□□ -0.61
SCFD1-202ENST00000396629 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
SCFD1-202ENST00000396629 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
SCFD1-202ENST00000396629 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
SCFD1-202ENST00000396629 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
SCFD1-202ENST00000396629 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 LAMB2P55268 1798 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 DLG5Q8TDM6 1919 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 NTSR2O95665 410 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 GMPSP49915 693 aaPredicted RBP11.26□□□□□ -0.61
SCFD1-202ENST00000396629 HIRAP54198 1017 aaPredicted RBP11.26□□□□□ -0.61
SCFD1-202ENST00000396629 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
SCFD1-202ENST00000396629 TCERG1O14776 1098 aaKnown RBP11.25□□□□□ -0.61
SCFD1-202ENST00000396629 NOGQ13253 232 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 KIF6Q6ZMV9 814 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 SUPT20HQ8NEM7 779 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 CFAP53Q96M91 514 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
SCFD1-202ENST00000396629 GPTP24298 496 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 ZIC5Q96T25 663 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
SCFD1-202ENST00000396629 AKAP11Q9UKA4 1901 aa11.24□□□□□ -0.61
SCFD1-202ENST00000396629 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
SCFD1-202ENST00000396629 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
SCFD1-202ENST00000396629 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
SCFD1-202ENST00000396629 MIS18AQ9NYP9 233 aa11.24□□□□□ -0.61
SCFD1-202ENST00000396629 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
SCFD1-202ENST00000396629 TNIP1Q15025 636 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
SCFD1-202ENST00000396629 PPP1R42Q7Z4L9 355 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 TRPM4Q8TD43 1214 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms