RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 CAVIN1Q6NZI2 390 aaKnown RBP10.59□□□□□ -0.71
MSH5-205ENST00000395853 KRBA2Q6ZNG9 492 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 NGDNQ8NEJ9 315 aaKnown RBP10.59□□□□□ -0.71
MSH5-205ENST00000395853 LCMT1Q9UIC8 334 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 PHRF1Q9P1Y6 1649 aaKnown RBP10.59□□□□□ -0.71
MSH5-205ENST00000395853 A0A1W2PP64 1363 aa10.59□□□□□ -0.71
MSH5-205ENST00000395853 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 TPM3P06753 285 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 PPP4R3CPQ6ZMV5 832 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 RINLQ6ZS11 566 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 SRLQ86TD4 932 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 FAM182BQ5T319 152 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
MSH5-205ENST00000395853 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
MSH5-205ENST00000395853 COQ9O75208 318 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 SLFN5Q08AF3 891 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 PACS2Q86VP3 889 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 SMC5Q8IY18 1101 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 KIF1BPQ96EK5 621 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 KIAA0232Q92628 1395 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 RGPD3A6NKT7 1758 aaPredicted RBP10.57□□□□□ -0.72
MSH5-205ENST00000395853 RGPD4Q7Z3J3 1758 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 RBM5P52756 815 aaKnown RBP eCLIP10.57□□□□□ -0.72
MSH5-205ENST00000395853 CCT2P78371 535 aaKnown RBP10.57□□□□□ -0.72
MSH5-205ENST00000395853 TEX35Q5T0J7 233 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 DNAJC14Q6Y2X3 702 aaPredicted RBP10.57□□□□□ -0.72
MSH5-205ENST00000395853 SSH2Q76I76 1423 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 C17orf53Q8N3J3 647 aaPredicted RBP10.57□□□□□ -0.72
MSH5-205ENST00000395853 ZNF397Q8NF99 534 aaPredicted RBP10.57□□□□□ -0.72
MSH5-205ENST00000395853 GGNBP2Q9H3C7 697 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 ST7Q9NRC1 585 aa10.57□□□□□ -0.72
MSH5-205ENST00000395853 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 CLEC17AQ6ZS10 378 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 RRP15Q9Y3B9 282 aaKnown RBP10.56□□□□□ -0.72
MSH5-205ENST00000395853 CPDO75976 1380 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 MAGEA9P43362 315 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 INHBEP58166 350 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 C1QTNF12Q5T7M4 302 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
MSH5-205ENST00000395853 NEK11Q8NG66 645 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
MSH5-205ENST00000395853 ANKRD33BA6NCL7 494 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 KCNQ2O43526 872 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 ZSCAN26Q16670 478 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
MSH5-205ENST00000395853 PLEKHG2Q9H7P9 1386 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
MSH5-205ENST00000395853 C22orf23Q9BZE7 217 aa10.55□□□□□ -0.72
MSH5-205ENST00000395853 LMO7Q8WWI1 1683 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 FYB1O15117 783 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 EVA1CP58658 441 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 RABEP1Q15276 862 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 JAKMIP3Q5VZ66 844 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 LRSAM1Q6UWE0 723 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 NSD2O96028 1365 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 NRDCO43847 1150 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 CAND2O75155 1236 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 ERCC4Q92889 916 aaPredicted RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 TTC12Q9H892 705 aaPredicted RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
MSH5-205ENST00000395853 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
MSH5-205ENST00000395853 PAX7P23759 505 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 PPP1R1BQ9UD71 204 aaPredicted RBP10.53□□□□□ -0.72
MSH5-205ENST00000395853 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 PLSCR1O15162 318 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 IRX1P78414 480 aaPredicted RBP10.53□□□□□ -0.72
MSH5-205ENST00000395853 GPS2Q13227 327 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 CHRNA2Q15822 529 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 CFAP53Q96M91 514 aa10.53□□□□□ -0.72
MSH5-205ENST00000395853 CAMTA1Q9Y6Y1 1673 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.72
MSH5-205ENST00000395853 POLD1P28340 1107 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 PLCB2Q00722 1185 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 SETDB1Q15047 1291 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 TTC19Q6DKK2 380 aaPredicted RBP10.52□□□□□ -0.72
MSH5-205ENST00000395853 MMS22LQ6ZRQ5 1243 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.72
MSH5-205ENST00000395853 RUNDC1Q96C34 613 aa10.52□□□□□ -0.72
MSH5-205ENST00000395853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.722e-8■■■■■ 52
MSH5-205ENST00000395853 HSP90AB4PQ58FF6 505 aa10.52□□□□□ -0.73
MSH5-205ENST00000395853 PPM1EQ8WY54 764 aa10.52□□□□□ -0.73
MSH5-205ENST00000395853 IRAK4Q9NWZ3 460 aa10.52□□□□□ -0.73
MSH5-205ENST00000395853 SMTNL1A8MU46 457 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 ZC3H6P61129 1189 aaKnown RBP10.51□□□□□ -0.73
MSH5-205ENST00000395853 NUCB2P80303 420 aa10.51□□□□□ -0.73
MSH5-205ENST00000395853 HDGFL2Q7Z4V5 671 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms