RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 COPS6Q7L5N1 327 aa14.45□□□□□ -0.1
PHACTR3-205ENST00000395636 C16orf71Q8IYS4 520 aaPredicted RBP14.45□□□□□ -0.1
PHACTR3-205ENST00000395636 NBPF7P0C2Y1 421 aaPredicted RBP14.45□□□□□ -0.1
PHACTR3-205ENST00000395636 ZNF830Q96NB3 372 aaPredicted RBP14.45□□□□□ -0.1
PHACTR3-205ENST00000395636 DOT1LQ8TEK3 1739 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 SLC4A9Q96Q91 983 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 KIF2CQ99661 725 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 N4BP2Q86UW6 1770 aaPredicted RBP14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 HYPKQ9NX55 129 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 USP21Q9UK80 565 aa14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 LRRFIP2Q9Y608 721 aaKnown RBP14.44□□□□□ -0.1
PHACTR3-205ENST00000395636 APBB1O00213 710 aa14.43□□□□□ -0.1
PHACTR3-205ENST00000395636 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
PHACTR3-205ENST00000395636 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
PHACTR3-205ENST00000395636 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
PHACTR3-205ENST00000395636 SRCIN1Q9C0H9 1055 aa14.43□□□□□ -0.1
PHACTR3-205ENST00000395636 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 KSR2Q6VAB6 950 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 THRAP3Q9Y2W1 955 aaKnown RBP14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 BCL9O00512 1426 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 PNMA6EA0A0J9YXQ4 647 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 KCNQ2O43526 872 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 PTF1AQ7RTS3 328 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 DNAJC10Q8IXB1 793 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 DDX49Q9Y6V7 483 aaKnown RBP14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 LAMB4A4D0S4 1761 aa14.42□□□□□ -0.1
PHACTR3-205ENST00000395636 GTF2F1P35269 517 aaKnown RBP eCLIP14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 CLEC17AQ6ZS10 378 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 OTUD7AQ8TE49 926 aaPredicted RBP14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 PXDNLA1KZ92 1463 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 SDSP20132 328 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 VPS72Q15906 364 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 MEX3CQ5U5Q3 659 aaKnown RBP14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 BARGINQ6ZT62 677 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 TTLL7Q6ZT98 887 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 JARID2Q92833 1246 aaPredicted RBP14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
PHACTR3-205ENST00000395636 IGKV5-2P06315 115 aa14.4□□□□□ -0.1
PHACTR3-205ENST00000395636 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
PHACTR3-205ENST00000395636 ZNF330Q9Y3S2 320 aaPredicted RBP14.4□□□□□ -0.1
PHACTR3-205ENST00000395636 VGLL3A8MV65 326 aa14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 ATP8B2P98198 1209 aa14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 KIAA2012Q0VF49 1180 aa14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 UBTFL1P0CB47 393 aaPredicted RBP14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 AFF2P51816 1311 aa14.39□□□□□ -0.11
PHACTR3-205ENST00000395636 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 RABEP1Q15276 862 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 MYD88Q99836 296 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 PDE1AP54750 535 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 LRRCC1Q9C099 1032 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 CGNQ9P2M7 1197 aaKnown RBP14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 EXOC6BQ9Y2D4 811 aa14.38□□□□□ -0.11
PHACTR3-205ENST00000395636 REC8O95072 547 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 KCNQ4P56696 695 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 ATP2B3Q16720 1220 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 PLCD3Q8N3E9 789 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 DNAJC2Q99543 621 aaKnown RBP14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
PHACTR3-205ENST00000395636 KAZALD1Q96I82 304 aa14.36□□□□□ -0.11
PHACTR3-205ENST00000395636 KIF3AQ9Y496 699 aa14.36□□□□□ -0.11
PHACTR3-205ENST00000395636 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
PHACTR3-205ENST00000395636 ZNF771Q7L3S4 317 aaPredicted RBP14.36□□□□□ -0.11
PHACTR3-205ENST00000395636 C9orf78Q9NZ63 289 aaPredicted RBP14.36□□□□□ -0.11
PHACTR3-205ENST00000395636 NEURL1BA8MQ27 555 aa14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 CD2BP2O95400 341 aaKnown RBP14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 PPP1R42Q7Z4L9 355 aa14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 LINS1Q8NG48 757 aa14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 FEZ1Q99689 392 aa14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
PHACTR3-205ENST00000395636 ERC2O15083 957 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 RBSNQ9H1K0 784 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 SALL3Q9BXA9 1300 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 ZSCAN23Q3MJ62 389 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 PDCL2Q8N4E4 241 aa14.34□□□□□ -0.11
PHACTR3-205ENST00000395636 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.11
PHACTR3-205ENST00000395636 MX1P20591 662 aa14.33□□□□□ -0.11
PHACTR3-205ENST00000395636 SUCLG2Q96I99 432 aa14.33□□□□□ -0.11
PHACTR3-205ENST00000395636 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.11
PHACTR3-205ENST00000395636 ZBTB1Q9Y2K1 713 aa14.33□□□□□ -0.11
PHACTR3-205ENST00000395636 GRM8O00222 908 aa14.33□□□□□ -0.12
PHACTR3-205ENST00000395636 ALDH1L1O75891 902 aa14.33□□□□□ -0.12
PHACTR3-205ENST00000395636 GABPB1Q06547 395 aaPredicted RBP14.33□□□□□ -0.12
PHACTR3-205ENST00000395636 TJP1Q07157 1748 aa14.33□□□□□ -0.12
PHACTR3-205ENST00000395636 GCKRQ14397 625 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms