RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SYT1P21579 422 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 AK2P54819 239 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 CCT2P78371 535 aaKnown RBP10.43□□□□□ -0.74
RTN4-206ENST00000394611 NDUFB9Q9Y6M9 179 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 PIK3C2AO00443 1686 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
RTN4-206ENST00000394611 KIF20BQ96Q89 1820 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 INSRP06213 1382 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 SPATA31A3Q5VYP0 1347 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 TTC21AQ8NDW8 1320 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 ZNF500O60304 480 aaPredicted RBP10.42□□□□□ -0.74
RTN4-206ENST00000394611 TEX35Q5T0J7 233 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 PRIMPOLQ96LW4 560 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 CEP135Q66GS9 1140 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 UNC5CLQ8IV45 518 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 NEUROD6Q96NK8 337 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 KINO60870 393 aaKnown RBP10.42□□□□□ -0.74
RTN4-206ENST00000394611 PHACTR2O75167 634 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 FAM193AP78312 1265 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 ARID5BQ14865 1188 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 RABEP2Q9H5N1 569 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 ZDHHC9Q9Y397 364 aa10.42□□□□□ -0.74
RTN4-206ENST00000394611 HSPA1LP34931 641 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 CEP85Q6P2H3 762 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
RTN4-206ENST00000394611 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 CNTROBQ8N137 903 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 TNS3Q68CZ2 1445 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 ZSCAN22P10073 491 aaPredicted RBP10.41□□□□□ -0.74
RTN4-206ENST00000394611 SKILP12757 684 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 CCDC85AQ96PX6 553 aaPredicted RBP10.41□□□□□ -0.74
RTN4-206ENST00000394611 SBNO1A3KN83 1393 aa10.41□□□□□ -0.74
RTN4-206ENST00000394611 AHDC1Q5TGY3 1603 aaPredicted RBP10.41□□□□□ -0.74
RTN4-206ENST00000394611 HAP1P54257 671 aaPredicted RBP10.4□□□□□ -0.74
RTN4-206ENST00000394611 DMTNQ08495 405 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 CHST3Q7LGC8 479 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 AACSQ86V21 672 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 LRRC59Q96AG4 307 aaKnown RBP10.4□□□□□ -0.74
RTN4-206ENST00000394611 ALS2Q96Q42 1657 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 FCHSD2O94868 740 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 MCM2P49736 904 aa10.4□□□□□ -0.74
RTN4-206ENST00000394611 RPAP2Q8IXW5 612 aaPredicted RBP10.4□□□□□ -0.74
RTN4-206ENST00000394611 CLASRPQ8N2M8 674 aaKnown RBP10.4□□□□□ -0.74
RTN4-206ENST00000394611 PA2G4Q9UQ80 394 aaKnown RBP10.4□□□□□ -0.74
RTN4-206ENST00000394611 PNMA6EA0A0J9YXQ4 647 aa10.4□□□□□ -0.75
RTN4-206ENST00000394611 UBE2HP62256 183 aa10.4□□□□□ -0.75
RTN4-206ENST00000394611 TYRO3Q06418 890 aa10.4□□□□□ -0.75
RTN4-206ENST00000394611 GPATCH3Q96I76 525 aa10.4□□□□□ -0.75
RTN4-206ENST00000394611 PRDM4Q9UKN5 801 aa10.4□□□□□ -0.75
RTN4-206ENST00000394611 ANKRD65E5RJM6 399 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 MCM5P33992 734 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 IPO4Q8TEX9 1081 aaKnown RBP10.39□□□□□ -0.75
RTN4-206ENST00000394611 UBXN4Q92575 508 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
RTN4-206ENST00000394611 LIG1P18858 919 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 TMC6Q7Z403 805 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 NEK11Q8NG66 645 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 DCTPP1Q9H773 170 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
RTN4-206ENST00000394611 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 SERPINC1P01008 464 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 LMAN1P49257 510 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 ALDH1L2Q3SY69 923 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 CPLX3Q8WVH0 158 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
RTN4-206ENST00000394611 LIMCH1Q9UPQ0 1083 aa10.39□□□□□ -0.75
RTN4-206ENST00000394611 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
RTN4-206ENST00000394611 F13A1P00488 732 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 POLR3DP05423 398 aaPredicted RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 SYT10Q6XYQ8 523 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 NOL10Q9BSC4 688 aaKnown RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 LETM1O95202 739 aaPredicted RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 PIP4K2AP48426 406 aaPredicted RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 BLOC1S2Q6QNY1 142 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 CCDC82Q8N4S0 544 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 ANKRD44Q8N8A2 993 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 DNAI1Q9UI46 699 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 NSD2O96028 1365 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 CT47B1P0C2W7 299 aaPredicted RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 ZC3H6P61129 1189 aaKnown RBP10.38□□□□□ -0.75
RTN4-206ENST00000394611 HSP90AB2PQ58FF8 381 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 RUFY2Q8WXA3 655 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 USP31Q70CQ4 1352 aa10.38□□□□□ -0.75
RTN4-206ENST00000394611 ANKRD26Q9UPS8 1709 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 KRT222Q8N1A0 295 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 MED1Q15648 1581 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 GCP02774 474 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 TPM4P67936 248 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 PPP1R42Q7Z4L9 355 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 ARHGEF10O15013 1369 aa10.37□□□□□ -0.75
RTN4-206ENST00000394611 NUTM2BA6NNL0 878 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 NUTM2EB1AL46 878 aaPredicted RBP10.37□□□□□ -0.75
RTN4-206ENST00000394611 CPLX1O14810 134 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms