RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 ZBTB16Q05516 673 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC50Q8IVM0 306 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 FAM212AQ96EL1 285 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 RASAL2Q9UJF2 1139 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TTC21AQ8NDW8 1320 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 CLGNO14967 610 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 HMGB1P09429 215 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 AFMP43652 599 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 DUSP27Q5VZP5 1158 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 USHBP1Q8N6Y0 703 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 CC2D2AQ9P2K1 1620 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 RTEL1-TNFRSF6BF6WH68 1400 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 ANKRD30BQ9BXX2 1392 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 GLRX3O76003 335 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 EEF2P13639 858 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 PTGS1P23219 599 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 UTP14AQ9BVJ6 771 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 STX6O43752 255 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 HAND2P61296 217 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 IFIT5Q13325 482 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 SELENOOQ9BVL4 669 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 PRDM11Q9NQV5 511 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TTC36A6NLP5 189 aa6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TBCAO75347 108 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 RPUSD2Q8IZ73 545 aaKnown RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 TTC12Q9H892 705 aaPredicted RBP6.5□□□□□ -1.37
GAPVD1-206ENST00000394104 PLEKHH1Q9ULM0 1364 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 ARID5AQ03989 594 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 RRAGBQ5VZM2 374 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 SKAP1Q86WV1 359 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 ATRIPQ8WXE1 791 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 PDIA4P13667 645 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 GRM1Q13255 1194 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 CAPZA3Q96KX2 299 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 NAA25Q14CX7 972 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 AKNAD1Q5T1N1 836 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC129Q6ZRS4 1044 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 DDX46Q7L014 1031 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 SMC6Q96SB8 1091 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 THUMPD2Q9BTF0 503 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 V9GYY5 206 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 TSPY2A6NKD2 308 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 NEMFO60524 1076 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 CEP57Q86XR8 500 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 SLF2Q8IX21 1173 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 ANKS4BQ8N8V4 417 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 DDX12PQ92771 950 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 ZNF692Q9BU19 519 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 RNF41Q9H4P4 317 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 TRMT112Q9UI30 125 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 USP16Q9Y5T5 823 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 NCAPD3P42695 1498 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 METAP2P50579 478 aaKnown RBP eCLIP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 UBASH3AP57075 661 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 SEPT6Q14141 434 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 MPRIPQ6WCQ1 1025 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 RPAP2Q8IXW5 612 aaPredicted RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 SEC62Q99442 399 aaKnown RBP6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
GAPVD1-206ENST00000394104 C6orf229H3BNL8 230 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 GOLIM4O00461 696 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 N4BP3O15049 544 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 GPTP24298 496 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 STAT6P42226 847 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 MCM6Q14566 821 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 TTF1Q15361 905 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 NBPF1Q3BBV0 1214 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 MRC2Q9UBG0 1479 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 MICU3Q86XE3 530 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 SMC1BQ8NDV3 1235 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 KCNK9Q9NPC2 374 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 DDX19AQ9NUU7 478 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 F6X3S4 739 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC121Q6ZUS5 278 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC172P0C7W6 258 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 KIF5BP33176 963 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 UBA7P41226 1012 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 DNAJC21Q5F1R6 531 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.48□□□□□ -1.371e-6■□□□□ 9.7
GAPVD1-206ENST00000394104 ERBINQ96RT1 1412 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 SLU7O95391 586 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 NFE2L2Q16236 605 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 GIMAP6Q6P9H5 292 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 SEPT14Q6ZU15 432 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 PROCA1Q8NCQ7 364 aaPredicted RBP6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 EHBP1Q8NDI1 1231 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 ZMYND15Q9H091 742 aa6.48□□□□□ -1.37
GAPVD1-206ENST00000394104 CFAP157Q5JU67 520 aa6.47□□□□□ -1.37
GAPVD1-206ENST00000394104 LRSAM1Q6UWE0 723 aa6.47□□□□□ -1.37
GAPVD1-206ENST00000394104 CCDC25Q86WR0 208 aa6.47□□□□□ -1.37
GAPVD1-206ENST00000394104 MPHOSPH6Q99547 160 aaKnown RBP6.47□□□□□ -1.37
GAPVD1-206ENST00000394104 PAXBP1Q9Y5B6 917 aa6.47□□□□□ -1.37
GAPVD1-206ENST00000394104 RPGRIP1LQ68CZ1 1315 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms