RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 EID1Q9Y6B2 187 aa13.91□□□□□ -0.18
R3HDM2-203ENST00000393811 SMTNL1A8MU46 457 aa13.9□□□□□ -0.18
R3HDM2-203ENST00000393811 TTC14Q96N46 770 aa13.9□□□□□ -0.18
R3HDM2-203ENST00000393811 CFAP45Q9UL16 551 aa13.9□□□□□ -0.18
R3HDM2-203ENST00000393811 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.18
R3HDM2-203ENST00000393811 MRVI1Q9Y6F6 885 aa13.9□□□□□ -0.18
R3HDM2-203ENST00000393811 SKILP12757 684 aa13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 ZSCAN20P17040 1043 aaPredicted RBP13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 ZNF75DP51815 510 aa13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 TPM4P67936 248 aa13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 IL17REQ8NFR9 667 aa13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.19
R3HDM2-203ENST00000393811 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 NAA30Q147X3 362 aaPredicted RBP13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 BRF1Q92994 677 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 AP5Z1O43299 807 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 NEXNQ0ZGT2 675 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 FLT4P35916 1363 aa13.89□□□□□ -0.19
R3HDM2-203ENST00000393811 EPB41L2O43491 1005 aaKnown RBP13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 DDX58O95786 925 aaKnown RBP13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 LEO1Q8WVC0 666 aaPredicted RBP13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 NR1I2O75469 434 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 KIF20AO95235 890 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 UTP14CQ5TAP6 766 aaKnown RBP13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 FEZ1Q99689 392 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 OGFRQ9NZT2 677 aa13.88□□□□□ -0.19
R3HDM2-203ENST00000393811 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 SLC27A2O14975 620 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 KIF18AQ8NI77 898 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 JAK2O60674 1132 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 GNL2Q13823 731 aaKnown RBP13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 NEUROD6Q96NK8 337 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 USP16Q9Y5T5 823 aa13.87□□□□□ -0.19
R3HDM2-203ENST00000393811 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 MYL6BP14649 208 aa13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 CACTINQ8WUQ7 758 aaKnown RBP13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 ERCC4Q92889 916 aaPredicted RBP13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 CPS1P31327 1500 aa13.86□□□□□ -0.19
R3HDM2-203ENST00000393811 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 A0A087WWV3 80 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 CCAR2Q8N163 923 aaKnown RBP13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 NEK1Q96PY6 1258 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 DBF4Q9UBU7 674 aaPredicted RBP13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 CRB1P82279 1406 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 MAP3K5Q99683 1374 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 KRT32Q14532 448 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 STX1AQ16623 288 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 KLHDC4Q8TBB5 520 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 SYTL4Q96C24 671 aaPredicted RBP13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 LGR6Q9HBX8 967 aa13.85□□□□□ -0.19
R3HDM2-203ENST00000393811 CCDC66A2RUB6 948 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 BIN1O00499 593 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 KCNQ3O43525 872 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 STK38Q15208 465 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 EDC3Q96F86 508 aaKnown RBP13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 ZNF396Q96N95 335 aaPredicted RBP13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 ANO10Q9NW15 660 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 Q6ZUG5 572 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 RPS6KB1P23443 525 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 AOPEPQ8N6M6 819 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
R3HDM2-203ENST00000393811 A0A0D9SFI3 127 aa13.83□□□□□ -0.19
R3HDM2-203ENST00000393811 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.19
R3HDM2-203ENST00000393811 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.19
R3HDM2-203ENST00000393811 NDUFB9Q9Y6M9 179 aa13.83□□□□□ -0.19
R3HDM2-203ENST00000393811 TCHHQ07283 1943 aa13.83□□□□□ -0.19
R3HDM2-203ENST00000393811 ARID5BQ14865 1188 aa13.83□□□□□ -0.2
R3HDM2-203ENST00000393811 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
R3HDM2-203ENST00000393811 ZNF215Q9UL58 517 aaPredicted RBP13.83□□□□□ -0.2
R3HDM2-203ENST00000393811 POLA2Q14181 598 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 FUCA2Q9BTY2 467 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 FRMPD1Q5SYB0 1578 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 CPLX1O14810 134 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 NEMFO60524 1076 aa13.82□□□□□ -0.2
R3HDM2-203ENST00000393811 HOXC9P31274 260 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms