RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
TDP1-203ENST00000393454 TSHZ3Q63HK5 1081 aa10.64□□□□□ -0.71
TDP1-203ENST00000393454 LINC00116Q8NCU8 138 aa10.64□□□□□ -0.71
TDP1-203ENST00000393454 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
TDP1-203ENST00000393454 MYH14Q7Z406 1995 aaKnown RBP10.63□□□□□ -0.71
TDP1-203ENST00000393454 NUP98P52948 1817 aa10.63□□□□□ -0.71
TDP1-203ENST00000393454 COL15A1P39059 1388 aa10.63□□□□□ -0.71
TDP1-203ENST00000393454 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
TDP1-203ENST00000393454 FOXO4P98177 505 aa10.63□□□□□ -0.71
TDP1-203ENST00000393454 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
TDP1-203ENST00000393454 ZNF772Q68DY9 489 aaPredicted RBP10.63□□□□□ -0.71
TDP1-203ENST00000393454 FAM89AQ96GI7 184 aa10.63□□□□□ -0.71
TDP1-203ENST00000393454 CCNL1Q9UK58 526 aaPredicted RBP10.63□□□□□ -0.71
TDP1-203ENST00000393454 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 KRT27Q7Z3Y8 459 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 NLRP10Q86W26 655 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 ZBTB38Q8NAP3 1195 aaPredicted RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 SBF2Q86WG5 1849 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 COL5A3P25940 1745 aaPredicted RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 CDC45O75419 566 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 TRMT112Q9UI30 125 aaKnown RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
TDP1-203ENST00000393454 ANKRD36CQ5JPF3 1778 aa10.62□□□□□ -0.71
TDP1-203ENST00000393454 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 SDSP20132 328 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 RFX5P48382 616 aaPredicted RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 FAM196AQ6ZSG2 479 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 TBC1D9Q6ZT07 1266 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 ZNF831Q5JPB2 1677 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 RREB1Q92766 1687 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 SASH1O94885 1247 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 AACSQ86V21 672 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 ZNF34Q8IZ26 560 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 SYNE4Q8N205 404 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
TDP1-203ENST00000393454 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
TDP1-203ENST00000393454 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
TDP1-203ENST00000393454 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
TDP1-203ENST00000393454 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
TDP1-203ENST00000393454 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
TDP1-203ENST00000393454 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
TDP1-203ENST00000393454 IRS4O14654 1257 aaPredicted RBP10.59□□□□□ -0.71
TDP1-203ENST00000393454 GNPATO15228 680 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 ADRA2BP18089 450 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
TDP1-203ENST00000393454 GPATCH3Q96I76 525 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 ZNF652Q9Y2D9 606 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 AOX1Q06278 1338 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 UBN2Q6ZU65 1347 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 CDHR2Q9BYE9 1310 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 TRIM37O94972 964 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 ZNF594Q96JF6 807 aaPredicted RBP10.59□□□□□ -0.71
TDP1-203ENST00000393454 PLA2G12BQ9BX93 195 aa10.59□□□□□ -0.71
TDP1-203ENST00000393454 CCDC8Q9H0W5 538 aaPredicted RBP10.59□□□□□ -0.71
TDP1-203ENST00000393454 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
TDP1-203ENST00000393454 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
TDP1-203ENST00000393454 TFCP2Q12800 502 aa10.58□□□□□ -0.72
TDP1-203ENST00000393454 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
TDP1-203ENST00000393454 SUSD4Q5VX71 490 aa10.58□□□□□ -0.72
TDP1-203ENST00000393454 DDRGK1Q96HY6 314 aa10.58□□□□□ -0.72
TDP1-203ENST00000393454 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
TDP1-203ENST00000393454 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.72
TDP1-203ENST00000393454 ERC2O15083 957 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 RPS6KA4O75676 772 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 EAF2Q96CJ1 260 aaPredicted RBP10.57□□□□□ -0.72
TDP1-203ENST00000393454 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
TDP1-203ENST00000393454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
TDP1-203ENST00000393454 LY75O60449 1722 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 EIF5BO60841 1220 aaKnown RBP10.57□□□□□ -0.72
TDP1-203ENST00000393454 ZPR1O75312 459 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 RXRBP28702 533 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 IFIT5Q13325 482 aaKnown RBP10.57□□□□□ -0.72
TDP1-203ENST00000393454 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
TDP1-203ENST00000393454 EYA2O00167 538 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 PDE8AO60658 829 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
TDP1-203ENST00000393454 CSF1RP07333 972 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 CTSWP56202 376 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 BICDL1Q6ZP65 573 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 AK7Q96M32 723 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 PHF14O94880 888 aa10.56□□□□□ -0.72
TDP1-203ENST00000393454 HCLS1P14317 486 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms