RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 COPS6Q7L5N1 327 aa28.48■■■□□ 2.15
PICALM-202ENST00000393346 MBD3O95983 291 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 IL1RAPL2Q9NP60 686 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 LRP6O75581 1613 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 XAGE3Q8WTP9 111 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 CHAMP1Q96JM3 812 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 TMEM63CQ9P1W3 806 aa28.47■■■□□ 2.15
PICALM-202ENST00000393346 BARGINQ6ZT62 677 aa28.46■■■□□ 2.15
PICALM-202ENST00000393346 PPP1R42Q7Z4L9 355 aa28.46■■■□□ 2.15
PICALM-202ENST00000393346 HS1BP3Q53T59 392 aa28.46■■■□□ 2.15
PICALM-202ENST00000393346 LRSAM1Q6UWE0 723 aa28.46■■■□□ 2.15
PICALM-202ENST00000393346 FAM98CQ17RN3 349 aaKnown RBP28.45■■■□□ 2.14
PICALM-202ENST00000393346 FOXD4L5Q5VV16 416 aaPredicted RBP28.45■■■□□ 2.14
PICALM-202ENST00000393346 RIC3Q7Z5B4 369 aa28.45■■■□□ 2.14
PICALM-202ENST00000393346 FOXD4L4Q8WXT5 416 aaPredicted RBP28.45■■■□□ 2.14
PICALM-202ENST00000393346 SURF6O75683 361 aaKnown RBP28.44■■■□□ 2.14
PICALM-202ENST00000393346 LRP10Q7Z4F1 713 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 ATG3Q9NT62 314 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 DOT1LQ8TEK3 1739 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 HSPA4P34932 840 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 NUTM1Q86Y26 1132 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 FNBP4Q8N3X1 1017 aaPredicted RBP28.44■■■□□ 2.14
PICALM-202ENST00000393346 PDLIM2Q96JY6 352 aa28.44■■■□□ 2.14
PICALM-202ENST00000393346 BCL9O00512 1426 aa28.43■■■□□ 2.14
PICALM-202ENST00000393346 NSFL1CQ9UNZ2 370 aaKnown RBP28.43■■■□□ 2.14
PICALM-202ENST00000393346 A0A0G2JS52 829 aa28.43■■■□□ 2.14
PICALM-202ENST00000393346 NBPF7P0C2Y1 421 aaPredicted RBP28.43■■■□□ 2.14
PICALM-202ENST00000393346 CWF19L2Q2TBE0 894 aaKnown RBP28.43■■■□□ 2.14
PICALM-202ENST00000393346 RHPN1Q8TCX5 695 aa28.43■■■□□ 2.14
PICALM-202ENST00000393346 IL25Q9H293 177 aa28.42■■■□□ 2.14
PICALM-202ENST00000393346 VPS72Q15906 364 aa28.42■■■□□ 2.14
PICALM-202ENST00000393346 MARCH10Q8NA82 808 aaPredicted RBP28.42■■■□□ 2.14
PICALM-202ENST00000393346 PI4K2BQ8TCG2 481 aa28.42■■■□□ 2.14
PICALM-202ENST00000393346 UPF3BQ9BZI7 483 aaKnown RBP28.42■■■□□ 2.14
PICALM-202ENST00000393346 USP21Q9UK80 565 aa28.42■■■□□ 2.14
PICALM-202ENST00000393346 A1BGP04217 495 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 ANKRD13DQ6ZTN6 518 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 NOL8Q76FK4 1167 aaKnown RBP28.41■■■□□ 2.14
PICALM-202ENST00000393346 KIF1BPQ96EK5 621 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 NBPF26B4DH59 902 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 NBPF14Q5TI25 921 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 NBPF10Q6P3W6 841 aaKnown RBP28.41■■■□□ 2.14
PICALM-202ENST00000393346 NBPF15Q8N660 670 aa28.41■■■□□ 2.14
PICALM-202ENST00000393346 MEX3CQ5U5Q3 659 aaKnown RBP28.4■■■□□ 2.14
PICALM-202ENST00000393346 SYCE3A1L190 88 aa28.4■■■□□ 2.14
PICALM-202ENST00000393346 MSNP26038 577 aaKnown RBP28.4■■■□□ 2.14
PICALM-202ENST00000393346 SRGAP3O43295 1099 aa28.39■■■□□ 2.14
PICALM-202ENST00000393346 ACSBG1Q96GR2 724 aa28.39■■■□□ 2.14
PICALM-202ENST00000393346 C9orf78Q9NZ63 289 aaPredicted RBP28.39■■■□□ 2.14
PICALM-202ENST00000393346 PRKCSHP14314 528 aaPredicted RBP28.38■■■□□ 2.13
PICALM-202ENST00000393346 LINS1Q8NG48 757 aa28.38■■■□□ 2.13
PICALM-202ENST00000393346 SGSM2O43147 1006 aa28.38■■■□□ 2.13
PICALM-202ENST00000393346 ALDH1L1O75891 902 aa28.38■■■□□ 2.13
PICALM-202ENST00000393346 RAD50Q92878 1312 aa28.37■■■□□ 2.13
PICALM-202ENST00000393346 NEXNQ0ZGT2 675 aa28.37■■■□□ 2.13
PICALM-202ENST00000393346 DNAJC10Q8IXB1 793 aa28.36■■■□□ 2.13
PICALM-202ENST00000393346 CNTROBQ8N137 903 aa28.36■■■□□ 2.13
PICALM-202ENST00000393346 WDR33Q9C0J8 1336 aaKnown RBP28.35■■■□□ 2.13
PICALM-202ENST00000393346 MAP4K4O95819 1239 aaPredicted RBP28.35■■■□□ 2.13
PICALM-202ENST00000393346 HSP90AB4PQ58FF6 505 aa28.35■■■□□ 2.13
PICALM-202ENST00000393346 VSIG10Q8N0Z9 540 aa28.35■■■□□ 2.13
PICALM-202ENST00000393346 ARFGEF2Q9Y6D5 1785 aa28.35■■■□□ 2.13
PICALM-202ENST00000393346 IGKV5-2P06315 115 aa28.35■■■□□ 2.13
PICALM-202ENST00000393346 MYD88Q99836 296 aa28.35■■■□□ 2.13
PICALM-202ENST00000393346 METTL22Q9BUU2 404 aaPredicted RBP28.34■■■□□ 2.13
PICALM-202ENST00000393346 NOL7Q9UMY1 257 aaKnown RBP28.34■■■□□ 2.13
PICALM-202ENST00000393346 SYAP1Q96A49 352 aaPredicted RBP28.33■■■□□ 2.13
PICALM-202ENST00000393346 TEX13AQ9BXU3 409 aaPredicted RBP28.33■■■□□ 2.13
PICALM-202ENST00000393346 LSG1Q9H089 658 aaKnown RBP28.33■■■□□ 2.13
PICALM-202ENST00000393346 USP42Q9H9J4 1324 aaKnown RBP28.33■■■□□ 2.13
PICALM-202ENST00000393346 SNX14Q9Y5W7 946 aa28.32■■■□□ 2.12
PICALM-202ENST00000393346 AFDNP55196 1824 aaKnown RBP28.32■■■□□ 2.12
PICALM-202ENST00000393346 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.32■■■□□ 2.12
PICALM-202ENST00000393346 OFD1O75665 1012 aa28.32■■■□□ 2.12
PICALM-202ENST00000393346 ZNF330Q9Y3S2 320 aaPredicted RBP28.32■■■□□ 2.12
PICALM-202ENST00000393346 TTLL7Q6ZT98 887 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 SLC4A9Q96Q91 983 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 EP400Q96L91 3159 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 GRM8O00222 908 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 STARD3NLO95772 234 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 TPM2P07951 284 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 PLBD2Q8NHP8 589 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 TTC14Q96N46 770 aa28.31■■■□□ 2.12
PICALM-202ENST00000393346 NEURL1BA8MQ27 555 aa28.3■■■□□ 2.12
PICALM-202ENST00000393346 TTC41PQ6P2S7 1318 aa28.3■■■□□ 2.12
PICALM-202ENST00000393346 MTX1Q13505 466 aa28.29■■■□□ 2.12
PICALM-202ENST00000393346 KIAA1211Q6ZU35 1233 aa28.29■■■□□ 2.12
PICALM-202ENST00000393346 UBE2Q2Q8WVN8 375 aa28.28■■■□□ 2.12
PICALM-202ENST00000393346 AFF2P51816 1311 aa28.28■■■□□ 2.12
PICALM-202ENST00000393346 ATP5J2-PTCD1G3V325 749 aa28.27■■■□□ 2.12
PICALM-202ENST00000393346 ZNF500O60304 480 aaPredicted RBP28.27■■■□□ 2.12
PICALM-202ENST00000393346 GLRX3O76003 335 aaKnown RBP28.27■■■□□ 2.12
PICALM-202ENST00000393346 TSPY26PQ9H489 355 aa28.27■■■□□ 2.12
PICALM-202ENST00000393346 RPAP1Q9BWH6 1393 aaPredicted RBP28.27■■■□□ 2.12
PICALM-202ENST00000393346 GCKRQ14397 625 aa28.27■■■□□ 2.12
PICALM-202ENST00000393346 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.27■■■□□ 2.12
PICALM-202ENST00000393346 USP48Q86UV5 1035 aa28.27■■■□□ 2.12
PICALM-202ENST00000393346 KCNQ2O43526 872 aa28.26■■■□□ 2.12
PICALM-202ENST00000393346 ZBTB3Q9H5J0 574 aa28.26■■■□□ 2.12
PICALM-202ENST00000393346 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms