RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 IL1RAPL2Q9NP60 686 aa21.59■■□□□ 1.05
MBD4-202ENST00000393278 ANP32AP39687 249 aaKnown RBP21.58■■□□□ 1.05
MBD4-202ENST00000393278 OS9Q13438 667 aaPredicted RBP21.58■■□□□ 1.05
MBD4-202ENST00000393278 NUP98P52948 1817 aa21.57■■□□□ 1.04
MBD4-202ENST00000393278 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
MBD4-202ENST00000393278 RFX5P48382 616 aaPredicted RBP21.57■■□□□ 1.04
MBD4-202ENST00000393278 ZNF772Q68DY9 489 aaPredicted RBP21.57■■□□□ 1.04
MBD4-202ENST00000393278 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
MBD4-202ENST00000393278 MX1P20591 662 aa21.56■■□□□ 1.04
MBD4-202ENST00000393278 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
MBD4-202ENST00000393278 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
MBD4-202ENST00000393278 ZBTB38Q8NAP3 1195 aaPredicted RBP21.56■■□□□ 1.04
MBD4-202ENST00000393278 STAP2Q9UGK3 403 aa21.56■■□□□ 1.04
MBD4-202ENST00000393278 LMBR1LQ6UX01 489 aa21.56■■□□□ 1.04
MBD4-202ENST00000393278 COPRSQ9NQ92 184 aa21.56■■□□□ 1.04
MBD4-202ENST00000393278 LY75O60449 1722 aa21.55■■□□□ 1.04
MBD4-202ENST00000393278 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
MBD4-202ENST00000393278 GPTP24298 496 aa21.55■■□□□ 1.04
MBD4-202ENST00000393278 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.04
MBD4-202ENST00000393278 AOX1Q06278 1338 aa21.55■■□□□ 1.04
MBD4-202ENST00000393278 BRWD3Q6RI45 1802 aa21.54■■□□□ 1.04
MBD4-202ENST00000393278 KRT27Q7Z3Y8 459 aa21.54■■□□□ 1.04
MBD4-202ENST00000393278 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
MBD4-202ENST00000393278 BCL11BQ9C0K0 894 aaPredicted RBP21.54■■□□□ 1.04
MBD4-202ENST00000393278 CDHR2Q9BYE9 1310 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 KCNQ4P56696 695 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 RBM6P78332 1123 aaKnown RBP21.53■■□□□ 1.04
MBD4-202ENST00000393278 PTPN12Q05209 780 aaKnown RBP21.53■■□□□ 1.04
MBD4-202ENST00000393278 RC3H1Q5TC82 1133 aaKnown RBP21.53■■□□□ 1.04
MBD4-202ENST00000393278 KLHDC4Q8TBB5 520 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 PLA2G12BQ9BX93 195 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 SASH1O94885 1247 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 CLASRPQ8N2M8 674 aaKnown RBP21.53■■□□□ 1.04
MBD4-202ENST00000393278 FAM89AQ96GI7 184 aa21.53■■□□□ 1.04
MBD4-202ENST00000393278 CCNL1Q9UK58 526 aaPredicted RBP21.53■■□□□ 1.04
MBD4-202ENST00000393278 CDC45O75419 566 aa21.52■■□□□ 1.04
MBD4-202ENST00000393278 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
MBD4-202ENST00000393278 SIL1Q9H173 461 aa21.52■■□□□ 1.04
MBD4-202ENST00000393278 UPF2Q9HAU5 1272 aaKnown RBP21.52■■□□□ 1.04
MBD4-202ENST00000393278 UBN2Q6ZU65 1347 aa21.51■■□□□ 1.03
MBD4-202ENST00000393278 SDSP20132 328 aa21.51■■□□□ 1.03
MBD4-202ENST00000393278 BCORQ6W2J9 1755 aa21.5■■□□□ 1.03
MBD4-202ENST00000393278 TSHZ3Q63HK5 1081 aa21.5■■□□□ 1.03
MBD4-202ENST00000393278 TBC1D9Q6ZT07 1266 aa21.5■■□□□ 1.03
MBD4-202ENST00000393278 USP42Q9H9J4 1324 aaKnown RBP21.5■■□□□ 1.03
MBD4-202ENST00000393278 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
MBD4-202ENST00000393278 TUBGCP6Q96RT7 1819 aa21.5■■□□□ 1.03
MBD4-202ENST00000393278 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
MBD4-202ENST00000393278 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
MBD4-202ENST00000393278 TAF1LQ8IZX4 1826 aa21.48■■□□□ 1.03
MBD4-202ENST00000393278 CSF1RP07333 972 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 MFAP1P55081 439 aaKnown RBP21.47■■□□□ 1.03
MBD4-202ENST00000393278 PARP10Q53GL7 1025 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 TBC1D32Q96NH3 1257 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.47■■□□□ 1.03
MBD4-202ENST00000393278 TTC41PQ6P2S7 1318 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 RGL2O15211 777 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 CLEC4GQ6UXB4 293 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 SYNE4Q8N205 404 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 PI4K2BQ8TCG2 481 aa21.47■■□□□ 1.03
MBD4-202ENST00000393278 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
MBD4-202ENST00000393278 IFIT2P09913 472 aaKnown RBP21.46■■□□□ 1.03
MBD4-202ENST00000393278 AACSQ86V21 672 aa21.46■■□□□ 1.03
MBD4-202ENST00000393278 IPO9Q96P70 1041 aaKnown RBP21.46■■□□□ 1.03
MBD4-202ENST00000393278 SUSD4Q5VX71 490 aa21.45■■□□□ 1.02
MBD4-202ENST00000393278 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.02
MBD4-202ENST00000393278 SCN7AQ01118 1682 aa21.45■■□□□ 1.02
MBD4-202ENST00000393278 GNPATO15228 680 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 C4BP0C0L5 1744 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
MBD4-202ENST00000393278 CTSWP56202 376 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 CCDC57Q2TAC2 916 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 UTP14AQ9BVJ6 771 aaKnown RBP21.44■■□□□ 1.02
MBD4-202ENST00000393278 ECHDC1Q9NTX5 307 aa21.44■■□□□ 1.02
MBD4-202ENST00000393278 NIP7Q9Y221 180 aaKnown RBP eCLIP21.44■■□□□ 1.02
MBD4-202ENST00000393278 SH3TC1Q8TE82 1336 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 PDE8AO60658 829 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 CIAO1O76071 339 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 TRIM37O94972 964 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 TFCP2Q12800 502 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 TTLL11Q8NHH1 800 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 AK7Q96M32 723 aa21.43■■□□□ 1.02
MBD4-202ENST00000393278 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
MBD4-202ENST00000393278 MYH3P11055 1940 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 EYA2O00167 538 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 ERC2O15083 957 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 GLRX3O76003 335 aaKnown RBP21.42■■□□□ 1.02
MBD4-202ENST00000393278 IL15P40933 162 aaPredicted RBP21.42■■□□□ 1.02
MBD4-202ENST00000393278 CASC1Q6TDU7 716 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 ILDR2Q71H61 639 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 LRRC4BQ9NT99 713 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 NARFQ9UHQ1 456 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 FBXO3Q9UK99 471 aa21.42■■□□□ 1.02
MBD4-202ENST00000393278 RXRBP28702 533 aa21.41■■□□□ 1.02
MBD4-202ENST00000393278 TNNI3KQ59H18 835 aa21.41■■□□□ 1.02
MBD4-202ENST00000393278 DDRGK1Q96HY6 314 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms