RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 SMARCC1Q92922 1105 aaPredicted RBP26.2■■□□□ 1.79
SPHK1-202ENST00000392496 ZBTB1Q9Y2K1 713 aa26.2■■□□□ 1.79
SPHK1-202ENST00000392496 TSHZ3Q63HK5 1081 aa26.2■■□□□ 1.78
SPHK1-202ENST00000392496 THSD7AQ9UPZ6 1657 aa26.2■■□□□ 1.78
SPHK1-202ENST00000392496 RFX5P48382 616 aaPredicted RBP26.19■■□□□ 1.78
SPHK1-202ENST00000392496 TTC41PQ6P2S7 1318 aa26.18■■□□□ 1.78
SPHK1-202ENST00000392496 FOXO4P98177 505 aa26.18■■□□□ 1.78
SPHK1-202ENST00000392496 BECN1Q14457 450 aa26.18■■□□□ 1.78
SPHK1-202ENST00000392496 GIGYF2Q6Y7W6 1299 aaKnown RBP26.18■■□□□ 1.78
SPHK1-202ENST00000392496 SASH1O94885 1247 aa26.18■■□□□ 1.78
SPHK1-202ENST00000392496 HSP90AB3PQ58FF7 597 aa26.18■■□□□ 1.78
SPHK1-202ENST00000392496 RREB1Q92766 1687 aa26.17■■□□□ 1.78
SPHK1-202ENST00000392496 LOC102724428A0A0B4J2F2 783 aa26.17■■□□□ 1.78
SPHK1-202ENST00000392496 SIK1P57059 783 aa26.17■■□□□ 1.78
SPHK1-202ENST00000392496 PI4K2BQ8TCG2 481 aa26.17■■□□□ 1.78
SPHK1-202ENST00000392496 PALLDQ8WX93 1383 aa26.16■■□□□ 1.78
SPHK1-202ENST00000392496 ZNF831Q5JPB2 1677 aa26.16■■□□□ 1.78
SPHK1-202ENST00000392496 ATP6V1AP38606 617 aa26.16■■□□□ 1.78
SPHK1-202ENST00000392496 ANKRD36CQ5JPF3 1778 aa26.16■■□□□ 1.78
SPHK1-202ENST00000392496 PTPN12Q05209 780 aaKnown RBP26.15■■□□□ 1.78
SPHK1-202ENST00000392496 LMBR1LQ6UX01 489 aa26.15■■□□□ 1.78
SPHK1-202ENST00000392496 ERVV-1B6SEH8 477 aa26.15■■□□□ 1.78
SPHK1-202ENST00000392496 GPATCH3Q96I76 525 aa26.14■■□□□ 1.78
SPHK1-202ENST00000392496 CCDC87Q9NVE4 849 aa26.14■■□□□ 1.78
SPHK1-202ENST00000392496 TRIM6-TRIM34B2RNG4 842 aa26.13■■□□□ 1.77
SPHK1-202ENST00000392496 KCNQ2O43526 872 aa26.13■■□□□ 1.77
SPHK1-202ENST00000392496 PCCAP05165 728 aaPredicted RBP26.13■■□□□ 1.77
SPHK1-202ENST00000392496 IFIT2P09913 472 aaKnown RBP26.13■■□□□ 1.77
SPHK1-202ENST00000392496 SIL1Q9H173 461 aa26.13■■□□□ 1.77
SPHK1-202ENST00000392496 ERC2O15083 957 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 GLRX3O76003 335 aaKnown RBP26.12■■□□□ 1.77
SPHK1-202ENST00000392496 EIF5P55010 431 aaKnown RBP26.12■■□□□ 1.77
SPHK1-202ENST00000392496 INTS5Q6P9B9 1019 aaKnown RBP26.12■■□□□ 1.77
SPHK1-202ENST00000392496 KRT27Q7Z3Y8 459 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 KLHDC4Q8TBB5 520 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 ARXQ96QS3 562 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 SLC4A3P48751 1232 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 AACSQ86V21 672 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 ECHDC1Q9NTX5 307 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 NUP98P52948 1817 aa26.12■■□□□ 1.77
SPHK1-202ENST00000392496 ITPK1Q13572 414 aa26.11■■□□□ 1.77
SPHK1-202ENST00000392496 HLFQ16534 295 aa26.11■■□□□ 1.77
SPHK1-202ENST00000392496 DZIP3Q86Y13 1208 aaKnown RBP26.11■■□□□ 1.77
SPHK1-202ENST00000392496 RILPL2Q969X0 211 aa26.11■■□□□ 1.77
SPHK1-202ENST00000392496 AK9Q5TCS8 1911 aa26.11■■□□□ 1.77
SPHK1-202ENST00000392496 CRKLP46109 303 aaKnown RBP26.1■■□□□ 1.77
SPHK1-202ENST00000392496 ZBTB38Q8NAP3 1195 aaPredicted RBP26.1■■□□□ 1.77
SPHK1-202ENST00000392496 PLA2G12BQ9BX93 195 aa26.1■■□□□ 1.77
SPHK1-202ENST00000392496 REC8O95072 547 aa26.1■■□□□ 1.77
SPHK1-202ENST00000392496 RTL5Q5HYW3 569 aaPredicted RBP26.1■■□□□ 1.77
SPHK1-202ENST00000392496 EAF2Q96CJ1 260 aaPredicted RBP26.1■■□□□ 1.77
SPHK1-202ENST00000392496 USP26Q9BXU7 913 aa26.1■■□□□ 1.77
SPHK1-202ENST00000392496 COL5A3P25940 1745 aaPredicted RBP26.09■■□□□ 1.77
SPHK1-202ENST00000392496 NLRP10Q86W26 655 aa26.09■■□□□ 1.77
SPHK1-202ENST00000392496 CDHR2Q9BYE9 1310 aa26.09■■□□□ 1.77
SPHK1-202ENST00000392496 CHMLP26374 656 aa26.08■■□□□ 1.77
SPHK1-202ENST00000392496 ANP32EQ9BTT0 268 aa26.08■■□□□ 1.77
SPHK1-202ENST00000392496 CNTROBQ8N137 903 aa26.07■■□□□ 1.76
SPHK1-202ENST00000392496 CHMP3Q9Y3E7 222 aa26.07■■□□□ 1.76
SPHK1-202ENST00000392496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.07■■□□□ 1.76
SPHK1-202ENST00000392496 NHSQ6T4R5 1651 aa26.07■■□□□ 1.76
SPHK1-202ENST00000392496 ESYT1Q9BSJ8 1104 aa26.07■■□□□ 1.76
SPHK1-202ENST00000392496 TBC1D2BQ9UPU7 963 aa26.07■■□□□ 1.76
SPHK1-202ENST00000392496 MYH14Q7Z406 1995 aaKnown RBP26.07■■□□□ 1.76
SPHK1-202ENST00000392496 TBC1D2Q9BYX2 928 aa26.06■■□□□ 1.76
SPHK1-202ENST00000392496 KIF2CQ99661 725 aa26.05■■□□□ 1.76
SPHK1-202ENST00000392496 CCDC8Q9H0W5 538 aaPredicted RBP26.05■■□□□ 1.76
SPHK1-202ENST00000392496 GPTP24298 496 aa26.04■■□□□ 1.76
SPHK1-202ENST00000392496 FAM196AQ6ZSG2 479 aa26.04■■□□□ 1.76
SPHK1-202ENST00000392496 ZNF34Q8IZ26 560 aa26.04■■□□□ 1.76
SPHK1-202ENST00000392496 FAM89AQ96GI7 184 aa26.04■■□□□ 1.76
SPHK1-202ENST00000392496 TFCP2Q12800 502 aa26.03■■□□□ 1.76
SPHK1-202ENST00000392496 BTAF1O14981 1849 aa26.03■■□□□ 1.76
SPHK1-202ENST00000392496 CSF1RP07333 972 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 TNNI3KQ59H18 835 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 SNX21Q969T3 373 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 FPGT-TNNI3KV9GXZ4 949 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 CIAO1O76071 339 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 MAP4K4O95819 1239 aaPredicted RBP26.02■■□□□ 1.76
SPHK1-202ENST00000392496 IL15P40933 162 aaPredicted RBP26.02■■□□□ 1.76
SPHK1-202ENST00000392496 FBXO3Q9UK99 471 aa26.02■■□□□ 1.76
SPHK1-202ENST00000392496 ATG9AQ7Z3C6 839 aa26.01■■□□□ 1.75
SPHK1-202ENST00000392496 GPR108Q9NPR9 543 aa26.01■■□□□ 1.75
SPHK1-202ENST00000392496 EYA2O00167 538 aa26■■□□□ 1.75
SPHK1-202ENST00000392496 TLR7Q9NYK1 1049 aaKnown RBP26■■□□□ 1.75
SPHK1-202ENST00000392496 EPB41L2O43491 1005 aaKnown RBP26■■□□□ 1.75
SPHK1-202ENST00000392496 CAMTA2O94983 1202 aa26■■□□□ 1.75
SPHK1-202ENST00000392496 CCDC57Q2TAC2 916 aa26■■□□□ 1.75
SPHK1-202ENST00000392496 BRWD3Q6RI45 1802 aa25.99■■□□□ 1.75
SPHK1-202ENST00000392496 EVI5LQ96CN4 794 aa25.99■■□□□ 1.75
SPHK1-202ENST00000392496 TRMT112Q9UI30 125 aaKnown RBP25.99■■□□□ 1.75
SPHK1-202ENST00000392496 MYH3P11055 1940 aa25.99■■□□□ 1.75
SPHK1-202ENST00000392496 UBN2Q6ZU65 1347 aa25.98■■□□□ 1.75
SPHK1-202ENST00000392496 CNTNAP4Q9C0A0 1308 aa25.98■■□□□ 1.75
SPHK1-202ENST00000392496 HSCBQ8IWL3 235 aa25.98■■□□□ 1.75
SPHK1-202ENST00000392496 LINC00116Q8NCU8 138 aa25.98■■□□□ 1.75
SPHK1-202ENST00000392496 BCORQ6W2J9 1755 aa25.97■■□□□ 1.75
SPHK1-202ENST00000392496 IRS4O14654 1257 aaPredicted RBP25.97■■□□□ 1.75
SPHK1-202ENST00000392496 PTF1AQ7RTS3 328 aa25.97■■□□□ 1.75
SPHK1-202ENST00000392496 DBNLQ9UJU6 430 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms