RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 ABCC12Q96J65 1359 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 SH3TC1Q8TE82 1336 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 FAM177BA6PVY3 158 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 POTECB2RU33 542 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 FZD9O00144 591 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 GPTP24298 496 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 IARSP41252 1262 aaKnown RBP9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 SUPT20HQ8NEM7 779 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 XAGE3Q8WTP9 111 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 JDP2Q8WYK2 163 aa9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
RNU1-56P-201ENST00000391303 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 BCORQ6W2J9 1755 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 APAF1O14727 1248 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 DUSP27Q5VZP5 1158 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 PNMA8AQ86V59 439 aaPredicted RBP9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 LDHDQ86WU2 507 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 GPC2Q8N158 579 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 SYNE4Q8N205 404 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 JMYQ8N9B5 988 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 KLRG1Q96E93 195 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 ATP6V0A2Q9Y487 856 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 KDM3BQ7LBC6 1761 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 DLEC1Q9Y238 1755 aa9.14□□□□□ -0.95
RNU1-56P-201ENST00000391303 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 DDNO94850 711 aaPredicted RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 ISCA1Q9BUE6 129 aa9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 RTFDC1Q9BY42 306 aaPredicted RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 ZNF277Q9NRM2 450 aaPredicted RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 TRMT112Q9UI30 125 aaKnown RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 LAS1LQ9Y4W2 734 aaKnown RBP9.13□□□□□ -0.95
RNU1-56P-201ENST00000391303 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 IL16Q14005 1332 aa9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 AIMP1Q12904 312 aaKnown RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 SF3B3Q15393 1217 aaKnown RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 CCDC30Q5VVM6 783 aa9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 DDX46Q7L014 1031 aaKnown RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 SP8Q8IXZ3 490 aa9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 TAF1DQ9H5J8 278 aaPredicted RBP9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 HACL1Q9UJ83 578 aa9.12□□□□□ -0.95
RNU1-56P-201ENST00000391303 TNRC6CQ9HCJ0 1690 aaKnown RBP9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 DDX58O95786 925 aaKnown RBP9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 ANXA1P04083 346 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 GRAPQ13588 217 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 KRT24Q2M2I5 525 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 GRAPLQ8TC17 118 aaPredicted RBP9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 WDR90Q96KV7 1748 aa9.11□□□□□ -0.95
RNU1-56P-201ENST00000391303 ABCC4O15439 1325 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 CDHR2Q9BYE9 1310 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 EPHX2P34913 555 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 NIM1KQ8IY84 436 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 CCDC191Q8NCU4 936 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 ANKRD31Q8N7Z5 1873 aa9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 VIRMAQ69YN4 1812 aaKnown RBP9.1□□□□□ -0.95
RNU1-56P-201ENST00000391303 ZNF541Q9H0D2 1346 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 ANP32CO43423 234 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 LMOD1P29536 600 aaPredicted RBP9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 KIAA2012Q0VF49 1180 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 OLFM4Q6UX06 510 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 DPP8Q6V1X1 898 aaPredicted RBP9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 C3orf67Q6ZVT6 689 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 MPNDQ8N594 471 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 ZBTB38Q8NAP3 1195 aaPredicted RBP9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
RNU1-56P-201ENST00000391303 COL11A2P13942 1736 aaPredicted RBP9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 ZNF316A6NFI3 1004 aaPredicted RBP9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 PPIP5K2O43314 1243 aa9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 USP50Q70EL3 339 aaPredicted RBP9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 WDR63Q8IWG1 891 aa9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 STK31Q9BXU1 1019 aa9.08□□□□□ -0.96
RNU1-56P-201ENST00000391303 PASKQ96RG2 1323 aa9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 IRS4O14654 1257 aaPredicted RBP9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 ITGBL1O95965 494 aaPredicted RBP9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 PCCAP05165 728 aaPredicted RBP9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 TNIP1Q15025 636 aa9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 C8orf58Q8NAV2 365 aa9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 ZC3H15Q8WU90 426 aaKnown RBP9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 METTL22Q9BUU2 404 aaPredicted RBP9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
RNU1-56P-201ENST00000391303 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
RNU1-56P-201ENST00000391303 SLX4Q8IY92 1834 aa9.06□□□□□ -0.96
RNU1-56P-201ENST00000391303 TMEM88BA6NKF7 163 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms