RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 CHMP4AQ9BY43 222 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
NEK4-202ENST00000383721 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 CNTROBQ8N137 903 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 SNX14Q9Y5W7 946 aa16.74■□□□□ 0.27
NEK4-202ENST00000383721 ZSCAN30Q86W11 494 aa16.73■□□□□ 0.27
NEK4-202ENST00000383721 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
NEK4-202ENST00000383721 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
NEK4-202ENST00000383721 PDLIM2Q96JY6 352 aa16.73■□□□□ 0.27
NEK4-202ENST00000383721 MTX1Q13505 466 aa16.72■□□□□ 0.27
NEK4-202ENST00000383721 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
NEK4-202ENST00000383721 TTC14Q96N46 770 aa16.72■□□□□ 0.27
NEK4-202ENST00000383721 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
NEK4-202ENST00000383721 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
NEK4-202ENST00000383721 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
NEK4-202ENST00000383721 PROSER3Q2NL68 480 aa16.71■□□□□ 0.27
NEK4-202ENST00000383721 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
NEK4-202ENST00000383721 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
NEK4-202ENST00000383721 TTC41PQ6P2S7 1318 aa16.7■□□□□ 0.26
NEK4-202ENST00000383721 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 MAP3K2Q9Y2U5 619 aa16.7■□□□□ 0.26
NEK4-202ENST00000383721 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
NEK4-202ENST00000383721 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 GLRX3O76003 335 aaKnown RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 OS9Q13438 667 aaPredicted RBP16.7■□□□□ 0.26
NEK4-202ENST00000383721 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
NEK4-202ENST00000383721 GDPD2Q9HCC8 539 aa16.69■□□□□ 0.26
NEK4-202ENST00000383721 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
NEK4-202ENST00000383721 ALDH1L1O75891 902 aa16.69■□□□□ 0.26
NEK4-202ENST00000383721 AK2P54819 239 aa16.69■□□□□ 0.26
NEK4-202ENST00000383721 HS1BP3Q53T59 392 aa16.69■□□□□ 0.26
NEK4-202ENST00000383721 GADD45BO75293 160 aaPredicted RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 HEG1Q9ULI3 1381 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 ACSBG1Q96GR2 724 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 DCAF5Q96JK2 942 aa16.68■□□□□ 0.26
NEK4-202ENST00000383721 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 PA2G4Q9UQ80 394 aaKnown RBP16.68■□□□□ 0.26
NEK4-202ENST00000383721 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
NEK4-202ENST00000383721 KRT27Q7Z3Y8 459 aa16.67■□□□□ 0.26
NEK4-202ENST00000383721 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
NEK4-202ENST00000383721 ECHDC1Q9NTX5 307 aa16.67■□□□□ 0.26
NEK4-202ENST00000383721 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
NEK4-202ENST00000383721 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
NEK4-202ENST00000383721 CPA1P15085 419 aa16.66■□□□□ 0.26
NEK4-202ENST00000383721 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
NEK4-202ENST00000383721 DIAPH3Q9NSV4 1193 aa16.66■□□□□ 0.26
NEK4-202ENST00000383721 PTH1RQ03431 593 aa16.66■□□□□ 0.26
NEK4-202ENST00000383721 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
NEK4-202ENST00000383721 RNF214Q8ND24 703 aa16.66■□□□□ 0.26
NEK4-202ENST00000383721 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
NEK4-202ENST00000383721 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.65■□□□□ 0.26
NEK4-202ENST00000383721 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
NEK4-202ENST00000383721 KCNQ2O43526 872 aa16.65■□□□□ 0.26
NEK4-202ENST00000383721 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
NEK4-202ENST00000383721 ADAMTS7Q9UKP4 1686 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
NEK4-202ENST00000383721 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
NEK4-202ENST00000383721 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
NEK4-202ENST00000383721 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 LARGE1O95461 756 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
NEK4-202ENST00000383721 SYT1P21579 422 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 TSPY26PQ9H489 355 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
NEK4-202ENST00000383721 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
NEK4-202ENST00000383721 ADCK5Q3MIX3 580 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 OFD1O75665 1012 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 AACSQ86V21 672 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 SLC52A2Q9HAB3 445 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
NEK4-202ENST00000383721 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
NEK4-202ENST00000383721 GRM8O00222 908 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 STX6O43752 255 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 SASH1O94885 1247 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 CABP4P57796 275 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
NEK4-202ENST00000383721 KCNB2Q92953 911 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 UTYO14607 1347 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 EVI5LQ96CN4 794 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 JAKMIP1Q96N16 626 aaKnown RBP16.62■□□□□ 0.25
NEK4-202ENST00000383721 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
NEK4-202ENST00000383721 HDAC5Q9UQL6 1122 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms