RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 GOLGA1Q92805 767 aa13.26□□□□□ -0.29
THUMPD1-201ENST00000381337 GOLGA8BA8MQT2 603 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 KCNG4Q8TDN1 519 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 LRMPQ12912 555 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 CEP131Q9UPN4 1083 aa13.25□□□□□ -0.29
THUMPD1-201ENST00000381337 LIG1P18858 919 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 HSP90AA4PQ58FG1 418 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 VPS37DQ86XT2 251 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 VPS18Q9P253 973 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 ZNF215Q9UL58 517 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 PYCARDQ9ULZ3 195 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 GOLGA6L7A0A1B0GV03 622 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CTAGE15A4D2H0 777 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 DTNBO60941 627 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CTAGE8P0CG41 777 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 RNF187Q5TA31 235 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 ZSCAN25Q6NSZ9 544 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CTAGE6Q86UF2 777 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 NUP88Q99567 741 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 CLSTN2Q9H4D0 955 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 SNX14Q9Y5W7 946 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 ERLIN2O94905 339 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
THUMPD1-201ENST00000381337 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 PHACTR2O75167 634 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 TTC31Q49AM3 519 aaPredicted RBP13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 Q6ZUG5 572 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 ZBTB9Q96C00 473 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 UTP14AQ9BVJ6 771 aaKnown RBP13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 NACAP1Q9BZK3 213 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 YEATS4O95619 227 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 PAFAH1B1P43034 410 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 SPA17Q15506 151 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
THUMPD1-201ENST00000381337 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 SGSM2O43147 1006 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 CARD6Q9BX69 1037 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 KDM5CP41229 1560 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 TTC41PQ6P2S7 1318 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 ANXA1P04083 346 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 MICALL1Q8N3F8 863 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 MTMR7Q9Y216 660 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 RTL1A6NKG5 1358 aa13.22□□□□□ -0.29
THUMPD1-201ENST00000381337 ADGRL2O95490 1459 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 RAPGEF3O95398 923 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 PDLIM2Q96JY6 352 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 CCDC175P0C221 793 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 MSH6P52701 1360 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
THUMPD1-201ENST00000381337 ZNF213O14771 459 aa13.21□□□□□ -0.3
THUMPD1-201ENST00000381337 SPTLC2O15270 562 aa13.21□□□□□ -0.3
THUMPD1-201ENST00000381337 HSPA4P34932 840 aa13.21□□□□□ -0.3
THUMPD1-201ENST00000381337 RAD50Q92878 1312 aa13.21□□□□□ -0.3
THUMPD1-201ENST00000381337 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
THUMPD1-201ENST00000381337 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 HSP90AB2PQ58FF8 381 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 ATP10BO94823 1461 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 PPP2R3AQ06190 1150 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 RAB11FIP4Q86YS3 637 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 UBAC1Q9BSL1 405 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 MAP3K2Q9Y2U5 619 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 GOLIM4O00461 696 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 IDH1O75874 414 aaKnown RBP13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 SHANK2Q9UPX8 1470 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 TUBB4BP68371 445 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 G2E3Q7L622 706 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
THUMPD1-201ENST00000381337 WDR62O43379 1518 aa13.19□□□□□ -0.3
THUMPD1-201ENST00000381337 EBAG9O00559 213 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms