RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 PRDM11Q9NQV5 511 aa23.28■■□□□ 1.32
FOXC1-201ENST00000380874 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
FOXC1-201ENST00000380874 EVA1CP58658 441 aa23.28■■□□□ 1.32
FOXC1-201ENST00000380874 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 CREB3L3Q68CJ9 461 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 DDX46Q7L014 1031 aaKnown RBP23.27■■□□□ 1.32
FOXC1-201ENST00000380874 SNRPA1P09661 255 aaKnown RBP23.27■■□□□ 1.32
FOXC1-201ENST00000380874 BICD2Q8TD16 824 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 FMNL2Q96PY5 1086 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 ZBTB3Q9H5J0 574 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
FOXC1-201ENST00000380874 HSPA2P54652 639 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 ADCY9O60503 1353 aa23.27■■□□□ 1.32
FOXC1-201ENST00000380874 CCDC171Q6TFL3 1326 aa23.27■■□□□ 1.31
FOXC1-201ENST00000380874 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.31
FOXC1-201ENST00000380874 TFIP11Q9UBB9 837 aaKnown RBP23.27■■□□□ 1.31
FOXC1-201ENST00000380874 CCDC39Q9UFE4 941 aa23.27■■□□□ 1.31
FOXC1-201ENST00000380874 USP25Q9UHP3 1055 aa23.27■■□□□ 1.31
FOXC1-201ENST00000380874 CLEC17AQ6ZS10 378 aa23.26■■□□□ 1.31
FOXC1-201ENST00000380874 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
FOXC1-201ENST00000380874 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
FOXC1-201ENST00000380874 HCLS1P14317 486 aaPredicted RBP23.26■■□□□ 1.31
FOXC1-201ENST00000380874 FAM173BQ6P4H8 233 aa23.26■■□□□ 1.31
FOXC1-201ENST00000380874 GIMAP6Q6P9H5 292 aa23.25■■□□□ 1.31
FOXC1-201ENST00000380874 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
FOXC1-201ENST00000380874 F13A1P00488 732 aa23.25■■□□□ 1.31
FOXC1-201ENST00000380874 CAMK4Q16566 473 aa23.25■■□□□ 1.31
FOXC1-201ENST00000380874 TFCP2Q12800 502 aa23.25■■□□□ 1.31
FOXC1-201ENST00000380874 LARGE1O95461 756 aa23.24■■□□□ 1.31
FOXC1-201ENST00000380874 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
FOXC1-201ENST00000380874 LMBR1LQ6UX01 489 aa23.24■■□□□ 1.31
FOXC1-201ENST00000380874 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.24■■□□□ 1.31
FOXC1-201ENST00000380874 SH2B1Q9NRF2 756 aaPredicted RBP23.24■■□□□ 1.31
FOXC1-201ENST00000380874 CCDC183Q5T5S1 534 aa23.24■■□□□ 1.31
FOXC1-201ENST00000380874 GCKRQ14397 625 aa23.23■■□□□ 1.31
FOXC1-201ENST00000380874 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
FOXC1-201ENST00000380874 SASH1O94885 1247 aa23.23■■□□□ 1.31
FOXC1-201ENST00000380874 KRT85P78386 507 aa23.23■■□□□ 1.31
FOXC1-201ENST00000380874 CCDC129Q6ZRS4 1044 aa23.23■■□□□ 1.31
FOXC1-201ENST00000380874 NEURL1BA8MQ27 555 aa23.22■■□□□ 1.31
FOXC1-201ENST00000380874 PDCP20941 246 aa23.22■■□□□ 1.31
FOXC1-201ENST00000380874 WASHC4Q2M389 1173 aa23.22■■□□□ 1.31
FOXC1-201ENST00000380874 SPC24Q8NBT2 197 aa23.21■■□□□ 1.31
FOXC1-201ENST00000380874 FKBP4Q02790 459 aaKnown RBP eCLIP23.21■■□□□ 1.31
FOXC1-201ENST00000380874 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
FOXC1-201ENST00000380874 CEMIPQ8WUJ3 1361 aa23.21■■□□□ 1.31
FOXC1-201ENST00000380874 GOLIM4O00461 696 aa23.21■■□□□ 1.31
FOXC1-201ENST00000380874 ZNF830Q96NB3 372 aaPredicted RBP23.21■■□□□ 1.31
FOXC1-201ENST00000380874 VPS53Q5VIR6 699 aa23.2■■□□□ 1.31
FOXC1-201ENST00000380874 METTL22Q9BUU2 404 aaPredicted RBP23.2■■□□□ 1.31
FOXC1-201ENST00000380874 UBE2HP62256 183 aa23.2■■□□□ 1.3
FOXC1-201ENST00000380874 ANKRD1Q15327 319 aa23.2■■□□□ 1.3
FOXC1-201ENST00000380874 SYTL4Q96C24 671 aaPredicted RBP23.2■■□□□ 1.3
FOXC1-201ENST00000380874 FAM13BQ9NYF5 915 aa23.2■■□□□ 1.3
FOXC1-201ENST00000380874 SLC27A2O14975 620 aa23.2■■□□□ 1.3
FOXC1-201ENST00000380874 RBM10P98175 930 aaKnown RBP23.2■■□□□ 1.3
FOXC1-201ENST00000380874 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
FOXC1-201ENST00000380874 ME3Q16798 604 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 PPP1R9BQ96SB3 815 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 ERBB3P21860 1342 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 IGKV5-2P06315 115 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 FBXW7Q969H0 707 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 PHKG2P15735 406 aa23.19■■□□□ 1.3
FOXC1-201ENST00000380874 SNRKQ9NRH2 765 aa23.18■■□□□ 1.3
FOXC1-201ENST00000380874 SPATA32Q96LK8 384 aa23.17■■□□□ 1.3
FOXC1-201ENST00000380874 ZRSR1Q15695 479 aaKnown RBP23.17■■□□□ 1.3
FOXC1-201ENST00000380874 CKAP2LQ8IYA6 745 aa23.17■■□□□ 1.3
FOXC1-201ENST00000380874 RGPD8O14715 1765 aaPredicted RBP23.16■■□□□ 1.3
FOXC1-201ENST00000380874 TIMM10P62072 90 aa23.16■■□□□ 1.3
FOXC1-201ENST00000380874 SEC62Q99442 399 aaKnown RBP23.16■■□□□ 1.3
FOXC1-201ENST00000380874 KDM4AO75164 1064 aa23.16■■□□□ 1.3
FOXC1-201ENST00000380874 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
FOXC1-201ENST00000380874 LETM1O95202 739 aaPredicted RBP23.15■■□□□ 1.3
FOXC1-201ENST00000380874 TPCN1Q9ULQ1 816 aa23.15■■□□□ 1.3
FOXC1-201ENST00000380874 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
FOXC1-201ENST00000380874 CCT2P78371 535 aaKnown RBP23.14■■□□□ 1.3
FOXC1-201ENST00000380874 TNNI3KQ59H18 835 aa23.14■■□□□ 1.3
FOXC1-201ENST00000380874 FPGT-TNNI3KV9GXZ4 949 aa23.14■■□□□ 1.3
FOXC1-201ENST00000380874 ARHGAP23Q9P227 1491 aa23.14■■□□□ 1.3
FOXC1-201ENST00000380874 A1BGP04217 495 aa23.14■■□□□ 1.3
FOXC1-201ENST00000380874 BRF1Q92994 677 aa23.14■■□□□ 1.3
FOXC1-201ENST00000380874 ADCY5O95622 1261 aa23.14■■□□□ 1.29
FOXC1-201ENST00000380874 GUCY1B3Q02153 619 aa23.14■■□□□ 1.29
FOXC1-201ENST00000380874 ZNF589Q86UQ0 364 aaPredicted RBP23.14■■□□□ 1.29
FOXC1-201ENST00000380874 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
FOXC1-201ENST00000380874 MTX1Q13505 466 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 TNMDQ9H2S6 317 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 ZSWIM6Q9HCJ5 1215 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 KRT32Q14532 448 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 ZNF594Q96JF6 807 aaPredicted RBP23.13■■□□□ 1.29
FOXC1-201ENST00000380874 NUP62CLQ9H1M0 184 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 SLIT1O75093 1534 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 CCDC192P0DO97 292 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 CEP126Q9P2H0 1117 aa23.13■■□□□ 1.29
FOXC1-201ENST00000380874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.13■■□□□ 1.29
FOXC1-201ENST00000380874 IFIT1P09914 478 aaKnown RBP23.12■■□□□ 1.29
FOXC1-201ENST00000380874 CCDC57Q2TAC2 916 aa23.12■■□□□ 1.29
FOXC1-201ENST00000380874 TTC14Q96N46 770 aa23.12■■□□□ 1.29
FOXC1-201ENST00000380874 FAM177BA6PVY3 158 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms