RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
DNMT3A-203ENST00000380746 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 SYT1P21579 422 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 KIF20BQ96Q89 1820 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
DNMT3A-203ENST00000380746 TTLL7Q6ZT98 887 aa13.07□□□□□ -0.32
DNMT3A-203ENST00000380746 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
DNMT3A-203ENST00000380746 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
DNMT3A-203ENST00000380746 RUFY3Q7L099 469 aa13.07□□□□□ -0.32
DNMT3A-203ENST00000380746 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
DNMT3A-203ENST00000380746 SASH1O94885 1247 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 COL9A3Q14050 684 aaPredicted RBP13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 TAF6LQ9Y6J9 622 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 HSPA4P34932 840 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 SLC52A2Q9HAB3 445 aa13.06□□□□□ -0.32
DNMT3A-203ENST00000380746 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 MBD3O95983 291 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 GCKRQ14397 625 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 ZNF589Q86UQ0 364 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 AGLP35573 1532 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 DDIT3P35638 169 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 C17orf53Q8N3J3 647 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
DNMT3A-203ENST00000380746 ADCY9O60503 1353 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 KDRP35968 1356 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 BRF1Q92994 677 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 RAD50Q92878 1312 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 TECPR2O15040 1411 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 PHKG2P15735 406 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 ME3Q16798 604 aa13.04□□□□□ -0.32
DNMT3A-203ENST00000380746 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 ERBB3P21860 1342 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 NUTM2BA6NNL0 878 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 NUTM2EB1AL46 878 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 CYP27B1O15528 508 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 JAK2O60674 1132 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 NUTM2AQ8IVF1 878 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
DNMT3A-203ENST00000380746 BRD1O95696 1058 aa13.02□□□□□ -0.32
DNMT3A-203ENST00000380746 PSMA5P28066 241 aa13.02□□□□□ -0.32
DNMT3A-203ENST00000380746 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.32
DNMT3A-203ENST00000380746 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.32
DNMT3A-203ENST00000380746 SYNE4Q8N205 404 aa13.02□□□□□ -0.32
DNMT3A-203ENST00000380746 NPHP1O15259 732 aa13.02□□□□□ -0.33
DNMT3A-203ENST00000380746 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-203ENST00000380746 POLA2Q14181 598 aa13.02□□□□□ -0.33
DNMT3A-203ENST00000380746 NCOA5Q9HCD5 579 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-203ENST00000380746 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
DNMT3A-203ENST00000380746 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 CCDC144CPQ8IYA2 1237 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 TTC12Q9H892 705 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 SLC27A2O14975 620 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 PHF14O94880 888 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 ANAPC15P60006 121 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 GNL2Q13823 731 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 CEP126Q9P2H0 1117 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 DBNLQ9UJU6 430 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 TBC1D2BQ9UPU7 963 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
DNMT3A-203ENST00000380746 DIP2AQ14689 1571 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 A0A087WWV3 80 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 F13A1P00488 732 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
DNMT3A-203ENST00000380746 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 Q6ZUG5 572 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 CDC37L1Q7L3B6 337 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 TMEM94Q12767 1356 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 RRP12Q5JTH9 1297 aaKnown RBP13□□□□□ -0.33
DNMT3A-203ENST00000380746 SPATA32Q96LK8 384 aa13□□□□□ -0.33
DNMT3A-203ENST00000380746 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 295.6 ms