RNA–Protein interactions for RNA: ENST00000379697.7

SH3KBP1-201, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 5 BASIC

Gene SH3KBP1, Length 1,944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-201ENST00000379697 OS9Q13438 667 aaPredicted RBP18.45■□□□□ 0.54
SH3KBP1-201ENST00000379697 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
SH3KBP1-201ENST00000379697 ANKRD36CQ5JPF3 1778 aa18.45■□□□□ 0.54
SH3KBP1-201ENST00000379697 NLRP10Q86W26 655 aa18.45■□□□□ 0.54
SH3KBP1-201ENST00000379697 LY75O60449 1722 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 PCCAP05165 728 aaPredicted RBP18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 FOXO4P98177 505 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 TTC22Q5TAA0 569 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 IL1RAPL2Q9NP60 686 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 SALL3Q9BXA9 1300 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 NUP98P52948 1817 aa18.44■□□□□ 0.54
SH3KBP1-201ENST00000379697 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 PDE1AP54750 535 aa18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
SH3KBP1-201ENST00000379697 MX1P20591 662 aa18.42■□□□□ 0.54
SH3KBP1-201ENST00000379697 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
SH3KBP1-201ENST00000379697 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
SH3KBP1-201ENST00000379697 G3BP1Q13283 466 aaKnown RBP eCLIP18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 KLHDC4Q8TBB5 520 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 FAM89AQ96GI7 184 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 CDHR2Q9BYE9 1310 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 FBXO41Q8TF61 875 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 SIL1Q9H173 461 aa18.41■□□□□ 0.54
SH3KBP1-201ENST00000379697 PTPN12Q05209 780 aaKnown RBP18.4■□□□□ 0.54
SH3KBP1-201ENST00000379697 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
SH3KBP1-201ENST00000379697 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
SH3KBP1-201ENST00000379697 SEC24BO95487 1268 aa18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 BCORQ6W2J9 1755 aa18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 TRIM37O94972 964 aa18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 TRMT112Q9UI30 125 aaKnown RBP18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
SH3KBP1-201ENST00000379697 GNPATO15228 680 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 SASH1O94885 1247 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 RXRBP28702 533 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 TSHZ3Q63HK5 1081 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 TAF1LQ8IZX4 1826 aa18.38■□□□□ 0.53
SH3KBP1-201ENST00000379697 AOX1Q06278 1338 aa18.37■□□□□ 0.53
SH3KBP1-201ENST00000379697 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
SH3KBP1-201ENST00000379697 SYNE4Q8N205 404 aa18.37■□□□□ 0.53
SH3KBP1-201ENST00000379697 CLEC4GQ6UXB4 293 aa18.37■□□□□ 0.53
SH3KBP1-201ENST00000379697 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
SH3KBP1-201ENST00000379697 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
SH3KBP1-201ENST00000379697 PARP10Q53GL7 1025 aa18.36■□□□□ 0.53
SH3KBP1-201ENST00000379697 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 RGL2O15211 777 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 SDSP20132 328 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 CDC45O75419 566 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
SH3KBP1-201ENST00000379697 CSF1RP07333 972 aa18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 AACSQ86V21 672 aa18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 RGS17Q9UGC6 210 aaPredicted RBP18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
SH3KBP1-201ENST00000379697 IFIT2P09913 472 aaKnown RBP18.33■□□□□ 0.53
SH3KBP1-201ENST00000379697 CTSWP56202 376 aa18.33■□□□□ 0.53
SH3KBP1-201ENST00000379697 CCDC57Q2TAC2 916 aa18.33■□□□□ 0.53
SH3KBP1-201ENST00000379697 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.53
SH3KBP1-201ENST00000379697 NARFQ9UHQ1 456 aa18.33■□□□□ 0.53
SH3KBP1-201ENST00000379697 AMIGO3Q86WK7 504 aa18.33■□□□□ 0.52
SH3KBP1-201ENST00000379697 AK7Q96M32 723 aa18.33■□□□□ 0.52
SH3KBP1-201ENST00000379697 TTC41PQ6P2S7 1318 aa18.32■□□□□ 0.52
SH3KBP1-201ENST00000379697 PDE8AO60658 829 aa18.32■□□□□ 0.52
SH3KBP1-201ENST00000379697 TTLL11Q8NHH1 800 aa18.32■□□□□ 0.52
SH3KBP1-201ENST00000379697 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
SH3KBP1-201ENST00000379697 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
SH3KBP1-201ENST00000379697 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 NTSR2O95665 410 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 TFCP2Q12800 502 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 CCDC85AQ96PX6 553 aaPredicted RBP18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 ZPR1O75312 459 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 CIAO1O76071 339 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 IFIT5Q13325 482 aaKnown RBP18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 BCL2L12Q9HB09 334 aa18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
SH3KBP1-201ENST00000379697 EYA2O00167 538 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms