RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 PLS1Q14651 629 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 CAMK4Q16566 473 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 MICU3Q86XE3 530 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 FAM83GA6ND36 823 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 USP8P40818 1118 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
LINC00654-201ENST00000379053 USP21Q9UK80 565 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
LINC00654-201ENST00000379053 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
LINC00654-201ENST00000379053 ABCC5O15440 1437 aa12.64□□□□□ -0.39
LINC00654-201ENST00000379053 ERLIN1O75477 346 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
LINC00654-201ENST00000379053 USP16Q9Y5T5 823 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC66A2RUB6 948 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 AMPD3Q01432 767 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 CTNNBL1Q8WYA6 563 aaPredicted RBP12.63□□□□□ -0.39
LINC00654-201ENST00000379053 COMMD10Q9Y6G5 202 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 PUF60Q9UHX1 559 aaKnown RBP12.63□□□□□ -0.39
LINC00654-201ENST00000379053 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 CTNNA2P26232 953 aa12.63□□□□□ -0.39
LINC00654-201ENST00000379053 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 EIF6P56537 245 aaKnown RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 B4DLN1 442 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 FAM193AP78312 1265 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 EYA3Q99504 573 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 APBA3O96018 575 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 UBA7P41226 1012 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 WDR70Q9NW82 654 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
LINC00654-201ENST00000379053 TBCAO75347 108 aaKnown RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 TDRD12Q587J7 1177 aaKnown RBP12.62□□□□□ -0.39
LINC00654-201ENST00000379053 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 METAP2P50579 478 aaKnown RBP eCLIP12.61□□□□□ -0.39
LINC00654-201ENST00000379053 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 GJA3Q9Y6H8 435 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC178Q5BJE1 867 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
LINC00654-201ENST00000379053 NSD2O96028 1365 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
LINC00654-201ENST00000379053 ERMNQ8TAM6 284 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 SLC26A6Q9BXS9 759 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
LINC00654-201ENST00000379053 GSTTP1A0A1W2PQM5 241 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 WDR7Q9Y4E6 1490 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 GNPATO15228 680 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
LINC00654-201ENST00000379053 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
LINC00654-201ENST00000379053 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
LINC00654-201ENST00000379053 PRC1O43663 620 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 FBLN1P23142 703 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 WTAPQ15007 396 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 HOOK3Q86VS8 718 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 ANO10Q9NW15 660 aa12.6□□□□□ -0.39
LINC00654-201ENST00000379053 TNNT1P13805 278 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 AKAP4Q5JQC9 854 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
LINC00654-201ENST00000379053 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 LEKR1Q6ZMV7 388 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 ORC3Q9UBD5 711 aaPredicted RBP12.59□□□□□ -0.39
LINC00654-201ENST00000379053 DNA2P51530 1060 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 SMARCC2Q8TAQ2 1214 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 NOP2P46087 812 aaKnown RBP12.59□□□□□ -0.39
LINC00654-201ENST00000379053 ESR2Q92731 530 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 GOLGA6L7A0A1B0GV03 622 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 NBPF7P0C2Y1 421 aaPredicted RBP12.59□□□□□ -0.39
LINC00654-201ENST00000379053 PSMD1Q99460 953 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
LINC00654-201ENST00000379053 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 KRT23Q9C075 422 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms