RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 G2E3Q7L622 706 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 TICAM2Q86XR7 235 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 UNC5CLQ8IV45 518 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 SPC24Q8NBT2 197 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 ARID3AQ99856 593 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 LRRFIP2Q9Y608 721 aaKnown RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 FLT4P35916 1363 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 NRDCO43847 1150 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 ANO6Q4KMQ2 910 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 USP44Q9H0E7 712 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 RNF216Q9NWF9 866 aaPredicted RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 CLIP2Q9UDT6 1046 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 FBXO3Q9UK99 471 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 GOLGA6L19H0YKK7 550 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 TPM1P09493 284 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 ZNF165P49910 485 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 RRS1Q15050 365 aaKnown RBP9.68□□□□□ -0.86
PTPRR-203ENST00000378778 NECTIN1Q15223 517 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 CCDC83Q8IWF9 413 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 RASEFQ8IZ41 740 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 SPATA32Q96LK8 384 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 IGSF1Q8N6C5 1336 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 RFX7Q2KHR2 1363 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 SLU7O95391 586 aaKnown RBP9.68□□□□□ -0.86
PTPRR-203ENST00000378778 KRT32Q14532 448 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 STX1AQ16623 288 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 LRRC8AQ8IWT6 810 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 JAKMIP1Q96N16 626 aaKnown RBP9.68□□□□□ -0.86
PTPRR-203ENST00000378778 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
PTPRR-203ENST00000378778 JCADQ9P266 1359 aa9.67□□□□□ -0.86
PTPRR-203ENST00000378778 USP6P35125 1406 aa9.67□□□□□ -0.86
PTPRR-203ENST00000378778 VPS37CA5D8V6 355 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 F6X3S4 739 aa9.67□□□□□ -0.86
PTPRR-203ENST00000378778 RGL2O15211 777 aa9.67□□□□□ -0.86
PTPRR-203ENST00000378778 SRRTQ9BXP5 876 aaKnown RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 PSDA5PKW4 1024 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 SURF6O75683 361 aaKnown RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 LEO1Q8WVC0 666 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 MAP4K1Q92918 833 aa9.67□□□□□ -0.86
PTPRR-203ENST00000378778 C16orf45Q96MC5 204 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 DNAJC2Q99543 621 aaKnown RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 NAT10Q9H0A0 1025 aaKnown RBP9.67□□□□□ -0.86
PTPRR-203ENST00000378778 FBLN1P23142 703 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 MED1Q15648 1581 aaPredicted RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 LUZP1Q86V48 1076 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 RGS22Q8NE09 1264 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 LLPHQ9BRT6 129 aaKnown RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 OSBPL5Q9H0X9 879 aaPredicted RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 ECHDC1Q9NTX5 307 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 DACT1Q9NYF0 836 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 IQCB1Q15051 598 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 ME3Q16798 604 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 TSHZ3Q63HK5 1081 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 CLASRPQ8N2M8 674 aaKnown RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 CACTINQ8WUQ7 758 aaKnown RBP9.66□□□□□ -0.86
PTPRR-203ENST00000378778 BPIFA3Q9BQP9 254 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 ANO10Q9NW15 660 aa9.66□□□□□ -0.86
PTPRR-203ENST00000378778 GNAT3A8MTJ3 354 aa9.65□□□□□ -0.86
PTPRR-203ENST00000378778 LIG1P18858 919 aa9.65□□□□□ -0.86
PTPRR-203ENST00000378778 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
PTPRR-203ENST00000378778 IL25Q9H293 177 aa9.65□□□□□ -0.86
PTPRR-203ENST00000378778 SLIT1O75093 1534 aa9.65□□□□□ -0.86
PTPRR-203ENST00000378778 KDM3BQ7LBC6 1761 aa9.65□□□□□ -0.87
PTPRR-203ENST00000378778 TAF7Q15545 349 aaPredicted RBP9.65□□□□□ -0.87
PTPRR-203ENST00000378778 TEX35Q5T0J7 233 aa9.65□□□□□ -0.87
PTPRR-203ENST00000378778 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.87
PTPRR-203ENST00000378778 ARGLU1Q9NWB6 273 aaPredicted RBP9.65□□□□□ -0.87
PTPRR-203ENST00000378778 MYO1BO43795 1136 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 LARGE1O95461 756 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 H2AFXP16104 143 aaPredicted RBP9.64□□□□□ -0.87
PTPRR-203ENST00000378778 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 FILIP1Q7Z7B0 1213 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 CCAR2Q8N163 923 aaKnown RBP9.64□□□□□ -0.87
PTPRR-203ENST00000378778 MPNDQ8N594 471 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 TULP2O00295 520 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 TPM4P67936 248 aa9.64□□□□□ -0.87
PTPRR-203ENST00000378778 NAA16Q6N069 864 aaPredicted RBP9.64□□□□□ -0.87
PTPRR-203ENST00000378778 CWC27Q6UX04 472 aaKnown RBP9.64□□□□□ -0.87
PTPRR-203ENST00000378778 V9GYY5 206 aaPredicted RBP9.64□□□□□ -0.87
PTPRR-203ENST00000378778 FAM177BA6PVY3 158 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 SKILP12757 684 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms