RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 LSG1Q9H089 658 aaKnown RBP20.63■□□□□ 0.89
TRIM27-201ENST00000377194 LRSAM1Q6UWE0 723 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 DCAF5Q96JK2 942 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 RAD50Q92878 1312 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 NEURL1BA8MQ27 555 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 MCM2P49736 904 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 DMTNQ08495 405 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 CUL4AQ13619 759 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
TRIM27-201ENST00000377194 ECHDC1Q9NTX5 307 aa20.62■□□□□ 0.89
TRIM27-201ENST00000377194 ZSCAN20P17040 1043 aaPredicted RBP20.61■□□□□ 0.89
TRIM27-201ENST00000377194 CBX1P83916 185 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 AACSQ86V21 672 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 RASEFQ8IZ41 740 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
TRIM27-201ENST00000377194 MYD88Q99836 296 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 HDAC5Q9UQL6 1122 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 EPB41L2O43491 1005 aaKnown RBP20.61■□□□□ 0.89
TRIM27-201ENST00000377194 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
TRIM27-201ENST00000377194 GCKRQ14397 625 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 SIL1Q9H173 461 aa20.61■□□□□ 0.89
TRIM27-201ENST00000377194 SNRPA1P09661 255 aaKnown RBP20.6■□□□□ 0.89
TRIM27-201ENST00000377194 METTL22Q9BUU2 404 aaPredicted RBP20.6■□□□□ 0.89
TRIM27-201ENST00000377194 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
TRIM27-201ENST00000377194 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
TRIM27-201ENST00000377194 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
TRIM27-201ENST00000377194 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
TRIM27-201ENST00000377194 CCDC8Q9H0W5 538 aaPredicted RBP20.59■□□□□ 0.89
TRIM27-201ENST00000377194 NEXNQ0ZGT2 675 aa20.59■□□□□ 0.89
TRIM27-201ENST00000377194 ZNF830Q96NB3 372 aaPredicted RBP20.59■□□□□ 0.89
TRIM27-201ENST00000377194 TLR7Q9NYK1 1049 aaKnown RBP20.59■□□□□ 0.89
TRIM27-201ENST00000377194 G3BP1Q13283 466 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRIM27-201ENST00000377194 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRIM27-201ENST00000377194 MCM5P33992 734 aa20.58■□□□□ 0.88
TRIM27-201ENST00000377194 BRINP3Q76B58 766 aa20.58■□□□□ 0.88
TRIM27-201ENST00000377194 CABP4P57796 275 aa20.57■□□□□ 0.88
TRIM27-201ENST00000377194 PTH1RQ03431 593 aa20.57■□□□□ 0.88
TRIM27-201ENST00000377194 ZNF710Q8N1W2 664 aa20.57■□□□□ 0.88
TRIM27-201ENST00000377194 C17orf53Q8N3J3 647 aaPredicted RBP20.57■□□□□ 0.88
TRIM27-201ENST00000377194 FMNL2Q96PY5 1086 aa20.57■□□□□ 0.88
TRIM27-201ENST00000377194 CPDO75976 1380 aa20.56■□□□□ 0.88
TRIM27-201ENST00000377194 INTS4Q96HW7 963 aaKnown RBP20.56■□□□□ 0.88
TRIM27-201ENST00000377194 DIAPH3Q9NSV4 1193 aa20.56■□□□□ 0.88
TRIM27-201ENST00000377194 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
TRIM27-201ENST00000377194 MRC1P22897 1456 aa20.56■□□□□ 0.88
TRIM27-201ENST00000377194 LARP6Q9BRS8 491 aaKnown RBP20.55■□□□□ 0.88
TRIM27-201ENST00000377194 BRD1O95696 1058 aa20.55■□□□□ 0.88
TRIM27-201ENST00000377194 ATP5J2-PTCD1G3V325 749 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
TRIM27-201ENST00000377194 MYRIPQ8NFW9 859 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 TTC14Q96N46 770 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 ABCC6O95255 1503 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 CPA1P15085 419 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 FGD1P98174 961 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 UTP14CQ5TAP6 766 aaKnown RBP20.54■□□□□ 0.88
TRIM27-201ENST00000377194 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
TRIM27-201ENST00000377194 PKD1L3Q7Z443 1732 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 UBE3BQ7Z3V4 1068 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 FAM227BQ96M60 508 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
TRIM27-201ENST00000377194 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
TRIM27-201ENST00000377194 PRDM11Q9NQV5 511 aa20.52■□□□□ 0.88
TRIM27-201ENST00000377194 AK2P54819 239 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 NBPF26B4DH59 902 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 RFX5P48382 616 aaPredicted RBP20.51■□□□□ 0.87
TRIM27-201ENST00000377194 NBPF14Q5TI25 921 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 NBPF10Q6P3W6 841 aaKnown RBP20.51■□□□□ 0.87
TRIM27-201ENST00000377194 NBPF15Q8N660 670 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
TRIM27-201ENST00000377194 SPDYE4A6NLX3 237 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 TOM1L2Q6ZVM7 507 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
TRIM27-201ENST00000377194 MBD3O95983 291 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 PRPF40BQ6NWY9 871 aaKnown RBP20.5■□□□□ 0.87
TRIM27-201ENST00000377194 WDR17Q8IZU2 1322 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 IGSF3O75054 1194 aa20.5■□□□□ 0.87
TRIM27-201ENST00000377194 PTPN12Q05209 780 aaKnown RBP20.5■□□□□ 0.87
TRIM27-201ENST00000377194 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
TRIM27-201ENST00000377194 NMIQ13287 307 aaPredicted RBP20.49■□□□□ 0.87
TRIM27-201ENST00000377194 ZCRB1Q8TBF4 217 aaKnown RBP20.49■□□□□ 0.87
TRIM27-201ENST00000377194 COPRSQ9NQ92 184 aa20.49■□□□□ 0.87
TRIM27-201ENST00000377194 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
TRIM27-201ENST00000377194 GLI3P10071 1580 aa20.49■□□□□ 0.87
TRIM27-201ENST00000377194 A0A087WZG4 1122 aa20.49■□□□□ 0.87
TRIM27-201ENST00000377194 DDX54Q8TDD1 881 aaKnown RBP20.49■□□□□ 0.87
TRIM27-201ENST00000377194 NECTIN1Q15223 517 aa20.48■□□□□ 0.87
TRIM27-201ENST00000377194 EDC3Q96F86 508 aaKnown RBP20.48■□□□□ 0.87
TRIM27-201ENST00000377194 TSPY26PQ9H489 355 aa20.48■□□□□ 0.87
TRIM27-201ENST00000377194 COL9A3Q14050 684 aaPredicted RBP20.48■□□□□ 0.87
TRIM27-201ENST00000377194 RABL6Q3YEC7 729 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms