RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
HLA-A-202ENST00000376806 ANTXR1Q9H6X2 564 aa20.55■□□□□ 0.88
HLA-A-202ENST00000376806 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-202ENST00000376806 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 KLHDC4Q8TBB5 520 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
HLA-A-202ENST00000376806 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 SIL1Q9H173 461 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 NUP98P52948 1817 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 GLRX3O76003 335 aaKnown RBP20.54■□□□□ 0.88
HLA-A-202ENST00000376806 IFIT2P09913 472 aaKnown RBP20.54■□□□□ 0.88
HLA-A-202ENST00000376806 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 AACSQ86V21 672 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 SLC4A9Q96Q91 983 aa20.54■□□□□ 0.88
HLA-A-202ENST00000376806 RREB1Q92766 1687 aa20.53■□□□□ 0.88
HLA-A-202ENST00000376806 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
HLA-A-202ENST00000376806 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.88
HLA-A-202ENST00000376806 RABEP1Q15276 862 aa20.52■□□□□ 0.88
HLA-A-202ENST00000376806 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
HLA-A-202ENST00000376806 CNTROBQ8N137 903 aa20.52■□□□□ 0.88
HLA-A-202ENST00000376806 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.88
HLA-A-202ENST00000376806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.52■□□□□ 0.88
HLA-A-202ENST00000376806 ONECUT3O60422 494 aaPredicted RBP20.52■□□□□ 0.87
HLA-A-202ENST00000376806 MAP4K4O95819 1239 aaPredicted RBP20.52■□□□□ 0.87
HLA-A-202ENST00000376806 PTPN12Q05209 780 aaKnown RBP20.52■□□□□ 0.87
HLA-A-202ENST00000376806 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.87
HLA-A-202ENST00000376806 A0A0G2JS52 829 aa20.51■□□□□ 0.87
HLA-A-202ENST00000376806 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
HLA-A-202ENST00000376806 FOXO4P98177 505 aa20.51■□□□□ 0.87
HLA-A-202ENST00000376806 MYT1Q01538 1121 aa20.51■□□□□ 0.87
HLA-A-202ENST00000376806 MYH3P11055 1940 aa20.51■□□□□ 0.87
HLA-A-202ENST00000376806 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
HLA-A-202ENST00000376806 NFKBIBQ15653 356 aa20.5■□□□□ 0.87
HLA-A-202ENST00000376806 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-202ENST00000376806 EAF2Q96CJ1 260 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-202ENST00000376806 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
HLA-A-202ENST00000376806 LMBR1LQ6UX01 489 aa20.5■□□□□ 0.87
HLA-A-202ENST00000376806 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
HLA-A-202ENST00000376806 RBM6P78332 1123 aaKnown RBP20.49■□□□□ 0.87
HLA-A-202ENST00000376806 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
HLA-A-202ENST00000376806 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
HLA-A-202ENST00000376806 THSD7AQ9UPZ6 1657 aa20.49■□□□□ 0.87
HLA-A-202ENST00000376806 COL5A3P25940 1745 aaPredicted RBP20.48■□□□□ 0.87
HLA-A-202ENST00000376806 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
HLA-A-202ENST00000376806 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-202ENST00000376806 TRIM28Q13263 835 aaKnown RBP20.47■□□□□ 0.87
HLA-A-202ENST00000376806 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
HLA-A-202ENST00000376806 ANO2Q9NQ90 1003 aa20.47■□□□□ 0.87
HLA-A-202ENST00000376806 TLR7Q9NYK1 1049 aaKnown RBP20.47■□□□□ 0.87
HLA-A-202ENST00000376806 ZNF831Q5JPB2 1677 aa20.47■□□□□ 0.87
HLA-A-202ENST00000376806 RXRBP28702 533 aa20.46■□□□□ 0.87
HLA-A-202ENST00000376806 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
HLA-A-202ENST00000376806 FAM182BQ5T319 152 aa20.45■□□□□ 0.86
HLA-A-202ENST00000376806 GIGYF2Q6Y7W6 1299 aaKnown RBP20.45■□□□□ 0.86
HLA-A-202ENST00000376806 ACSBG1Q96GR2 724 aa20.45■□□□□ 0.86
HLA-A-202ENST00000376806 IL25Q9H293 177 aa20.45■□□□□ 0.86
HLA-A-202ENST00000376806 EPB41L2O43491 1005 aaKnown RBP20.45■□□□□ 0.86
HLA-A-202ENST00000376806 MCCP23508 829 aa20.45■□□□□ 0.86
HLA-A-202ENST00000376806 TFCP2Q12800 502 aa20.44■□□□□ 0.86
HLA-A-202ENST00000376806 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
HLA-A-202ENST00000376806 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
HLA-A-202ENST00000376806 MYH14Q7Z406 1995 aaKnown RBP20.44■□□□□ 0.86
HLA-A-202ENST00000376806 SGSM2O43147 1006 aa20.43■□□□□ 0.86
HLA-A-202ENST00000376806 EVI5LQ96CN4 794 aa20.43■□□□□ 0.86
HLA-A-202ENST00000376806 PCCAP05165 728 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-202ENST00000376806 IL6STP40189 918 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-202ENST00000376806 HSP90AB3PQ58FF7 597 aa20.43■□□□□ 0.86
HLA-A-202ENST00000376806 ARXQ96QS3 562 aa20.43■□□□□ 0.86
HLA-A-202ENST00000376806 HLFQ16534 295 aa20.42■□□□□ 0.86
HLA-A-202ENST00000376806 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
HLA-A-202ENST00000376806 EP400Q96L91 3159 aa20.42■□□□□ 0.86
HLA-A-202ENST00000376806 DDIT3P35638 169 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 DIAPH3Q9NSV4 1193 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 DBNLQ9UJU6 430 aaKnown RBP20.41■□□□□ 0.86
HLA-A-202ENST00000376806 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 PALLDQ8WX93 1383 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 RAD50Q92878 1312 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 FRAT2O75474 233 aaPredicted RBP20.41■□□□□ 0.86
HLA-A-202ENST00000376806 ANAPC15P60006 121 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
HLA-A-202ENST00000376806 PLA2G12BQ9BX93 195 aa20.41■□□□□ 0.86
HLA-A-202ENST00000376806 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
HLA-A-202ENST00000376806 ZNF609O15014 1411 aa20.4■□□□□ 0.86
HLA-A-202ENST00000376806 ST18O60284 1047 aa20.4■□□□□ 0.86
HLA-A-202ENST00000376806 ATG9AQ7Z3C6 839 aa20.4■□□□□ 0.86
HLA-A-202ENST00000376806 PALD1Q9ULE6 856 aa20.4■□□□□ 0.86
HLA-A-202ENST00000376806 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.86
HLA-A-202ENST00000376806 NLRP10Q86W26 655 aa20.39■□□□□ 0.86
HLA-A-202ENST00000376806 IL17RAQ96F46 866 aa20.39■□□□□ 0.86
HLA-A-202ENST00000376806 CCDC87Q9NVE4 849 aa20.39■□□□□ 0.86
HLA-A-202ENST00000376806 LOC102724428A0A0B4J2F2 783 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 ERVV-1B6SEH8 477 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 GPTP24298 496 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 SIK1P57059 783 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 DZIP3Q86Y13 1208 aaKnown RBP20.39■□□□□ 0.85
HLA-A-202ENST00000376806 RUFY2Q8WXA3 655 aa20.39■□□□□ 0.85
HLA-A-202ENST00000376806 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
HLA-A-202ENST00000376806 BOLA2Q9H3K6 86 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms