RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 HSP90AB4PQ58FF6 505 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 BEND3Q5T5X7 828 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 LARP1Q6PKG0 1096 aaKnown RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 RBM43Q6ZSC3 357 aaKnown RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 LEO1Q8WVC0 666 aaPredicted RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 FAM227BQ96M60 508 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 ECHDC1Q9NTX5 307 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 CLIP2Q9UDT6 1046 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 ZNF165P49910 485 aa19.56■□□□□ 0.72
TRIM39-201ENST00000376656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 CLASRPQ8N2M8 674 aaKnown RBP19.56■□□□□ 0.72
TRIM39-201ENST00000376656 SCAND2PQ9GZW5 306 aaPredicted RBP19.55■□□□□ 0.72
TRIM39-201ENST00000376656 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
TRIM39-201ENST00000376656 PI4KAP2A4QPH2 592 aa19.55■□□□□ 0.72
TRIM39-201ENST00000376656 PI4KAP1Q8N8J0 262 aa19.55■□□□□ 0.72
TRIM39-201ENST00000376656 PDCP20941 246 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 ZNF771Q7L3S4 317 aaPredicted RBP19.54■□□□□ 0.72
TRIM39-201ENST00000376656 ZNF592Q92610 1267 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 PAXBP1Q9Y5B6 917 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 TAF6LQ9Y6J9 622 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 DNAAF4Q8WXU2 420 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 PGBD1Q96JS3 809 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 CGNQ9P2M7 1197 aaKnown RBP19.54■□□□□ 0.72
TRIM39-201ENST00000376656 DDX41Q9UJV9 622 aaKnown RBP19.54■□□□□ 0.72
TRIM39-201ENST00000376656 CHD2O14647 1828 aaKnown RBP19.54■□□□□ 0.72
TRIM39-201ENST00000376656 SLC27A2O14975 620 aa19.54■□□□□ 0.72
TRIM39-201ENST00000376656 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
TRIM39-201ENST00000376656 ANXA1P04083 346 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 STK3Q13188 491 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 NMIQ13287 307 aaPredicted RBP19.53■□□□□ 0.72
TRIM39-201ENST00000376656 CHPF2Q9P2E5 772 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 ARID5BQ14865 1188 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
TRIM39-201ENST00000376656 IFIT2P09913 472 aaKnown RBP19.52■□□□□ 0.72
TRIM39-201ENST00000376656 USP27XA6NNY8 438 aa19.52■□□□□ 0.72
TRIM39-201ENST00000376656 CEP135Q66GS9 1140 aa19.52■□□□□ 0.72
TRIM39-201ENST00000376656 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
TRIM39-201ENST00000376656 BLOC1S2Q6QNY1 142 aa19.51■□□□□ 0.71
TRIM39-201ENST00000376656 PSMA5P28066 241 aa19.51■□□□□ 0.71
TRIM39-201ENST00000376656 KIF18AQ8NI77 898 aa19.51■□□□□ 0.71
TRIM39-201ENST00000376656 BABAM1Q9NWV8 329 aa19.51■□□□□ 0.71
TRIM39-201ENST00000376656 PDIA4P13667 645 aaKnown RBP19.5■□□□□ 0.71
TRIM39-201ENST00000376656 AACSQ86V21 672 aa19.5■□□□□ 0.71
TRIM39-201ENST00000376656 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-201ENST00000376656 GPATCH3Q96I76 525 aa19.5■□□□□ 0.71
TRIM39-201ENST00000376656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-201ENST00000376656 MORC2Q9Y6X9 1032 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-201ENST00000376656 RPS6KB1P23443 525 aa19.5■□□□□ 0.71
TRIM39-201ENST00000376656 GABPB1Q06547 395 aaPredicted RBP19.5■□□□□ 0.71
TRIM39-201ENST00000376656 LRRC8AQ8IWT6 810 aa19.5■□□□□ 0.71
TRIM39-201ENST00000376656 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
TRIM39-201ENST00000376656 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRIM39-201ENST00000376656 V9GYY5 206 aaPredicted RBP19.49■□□□□ 0.71
TRIM39-201ENST00000376656 A0A0D9SFI3 127 aa19.49■□□□□ 0.71
TRIM39-201ENST00000376656 JAK2O60674 1132 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 SLFN14P0C7P3 912 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 CDC25BP30305 580 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 C11orf57Q6ZUT1 292 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-201ENST00000376656 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-201ENST00000376656 IQCB1Q15051 598 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 ADCY9O60503 1353 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-201ENST00000376656 MTX1Q13505 466 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 ANKRD1Q15327 319 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 DDX11Q96FC9 970 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 ZNF215Q9UL58 517 aaPredicted RBP19.48■□□□□ 0.71
TRIM39-201ENST00000376656 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
TRIM39-201ENST00000376656 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
TRIM39-201ENST00000376656 KCNQ3O43525 872 aa19.47■□□□□ 0.71
TRIM39-201ENST00000376656 HOXC9P31274 260 aa19.47■□□□□ 0.71
TRIM39-201ENST00000376656 KMT5BQ4FZB7 885 aa19.47■□□□□ 0.71
TRIM39-201ENST00000376656 CCDC8Q9H0W5 538 aaPredicted RBP19.46■□□□□ 0.71
TRIM39-201ENST00000376656 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
TRIM39-201ENST00000376656 RESTQ13127 1097 aa19.46■□□□□ 0.71
TRIM39-201ENST00000376656 NUTM2GQ5VZR2 741 aa19.46■□□□□ 0.71
TRIM39-201ENST00000376656 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
TRIM39-201ENST00000376656 HDGFP51858 240 aaKnown RBP19.46■□□□□ 0.71
TRIM39-201ENST00000376656 AGLP35573 1532 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 RBM6P78332 1123 aaKnown RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 BRF1Q92994 677 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 EAF2Q96CJ1 260 aaPredicted RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 A0A087WWV3 80 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 CEBPZQ03701 1054 aaKnown RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 PTPN14Q15678 1187 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 SARM1Q6SZW1 724 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 NYAP1Q6ZVC0 841 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 ZNF397Q8NF99 534 aaPredicted RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 TLR7Q9NYK1 1049 aaKnown RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 SKILP12757 684 aa19.45■□□□□ 0.7
TRIM39-201ENST00000376656 NLRP6P59044 892 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms