RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 TAF6LQ9Y6J9 622 aa13.65□□□□□ -0.22
TM9SF2-201ENST00000376387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 TNNT1P13805 278 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 ARID5BQ14865 1188 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 IL17REQ8NFR9 667 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 CACTINQ8WUQ7 758 aaKnown RBP13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 TRIM5Q9C035 493 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 ZNF75DP51815 510 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
TM9SF2-201ENST00000376387 USP27XA6NNY8 438 aa13.63□□□□□ -0.23
TM9SF2-201ENST00000376387 MLECQ14165 292 aa13.63□□□□□ -0.23
TM9SF2-201ENST00000376387 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
TM9SF2-201ENST00000376387 DNAJC25Q9H1X3 360 aa13.63□□□□□ -0.23
TM9SF2-201ENST00000376387 NR1I2O75469 434 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 ANXA1P04083 346 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 EIF2S2P20042 333 aaKnown RBP13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 KRT85P78386 507 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 FAM227BQ96M60 508 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 OGFRQ9NZT2 677 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 ROBO2Q9HCK4 1378 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 SMTNL1A8MU46 457 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
TM9SF2-201ENST00000376387 A0A087WWV3 80 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 STK3Q13188 491 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 ZNF771Q7L3S4 317 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 TPD52L1Q16890 204 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 FMN2Q9NZ56 1722 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 CREB3L3Q68CJ9 461 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 FEZ1Q99689 392 aa13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 N4BP2Q86UW6 1770 aaPredicted RBP13.61□□□□□ -0.23
TM9SF2-201ENST00000376387 USP6P35125 1406 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 CLGNO14967 610 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 KDRP35968 1356 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 USP31Q70CQ4 1352 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 SPATA32Q96LK8 384 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 LEO1Q8WVC0 666 aaPredicted RBP13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
TM9SF2-201ENST00000376387 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 ZBTB22O15209 634 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 AMPHP49418 695 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 ZNF165P49910 485 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 CCDC112Q8NEF3 446 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 KCNB2Q92953 911 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 TDRD7Q8NHU6 1098 aaKnown RBP13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
TM9SF2-201ENST00000376387 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 KCNJ4P48050 445 aa13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 ELP1O95163 1332 aa13.58□□□□□ -0.23
TM9SF2-201ENST00000376387 PXDNLA1KZ92 1463 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 BEND3Q5T5X7 828 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 CHPF2Q9P2E5 772 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 SLC27A2O14975 620 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 JAK2O60674 1132 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 CEP135Q66GS9 1140 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 KIF18AQ8NI77 898 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
TM9SF2-201ENST00000376387 KMT5BQ4FZB7 885 aa13.57□□□□□ -0.24
TM9SF2-201ENST00000376387 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms