RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
PDPN-202ENST00000376057 PDE1AP54750 535 aa13.72□□□□□ -0.21
PDPN-202ENST00000376057 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
PDPN-202ENST00000376057 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
PDPN-202ENST00000376057 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
PDPN-202ENST00000376057 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
PDPN-202ENST00000376057 PRKCSHP14314 528 aaPredicted RBP13.71□□□□□ -0.21
PDPN-202ENST00000376057 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
PDPN-202ENST00000376057 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
PDPN-202ENST00000376057 RBM6P78332 1123 aaKnown RBP13.71□□□□□ -0.22
PDPN-202ENST00000376057 NLRP10Q86W26 655 aa13.71□□□□□ -0.22
PDPN-202ENST00000376057 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.22
PDPN-202ENST00000376057 MYH3P11055 1940 aa13.71□□□□□ -0.22
PDPN-202ENST00000376057 CSF1RP07333 972 aa13.7□□□□□ -0.22
PDPN-202ENST00000376057 GSPT1P15170 499 aaKnown RBP13.7□□□□□ -0.22
PDPN-202ENST00000376057 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
PDPN-202ENST00000376057 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
PDPN-202ENST00000376057 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
PDPN-202ENST00000376057 MX1P20591 662 aa13.7□□□□□ -0.22
PDPN-202ENST00000376057 PARP10Q53GL7 1025 aa13.7□□□□□ -0.22
PDPN-202ENST00000376057 CIAO1O76071 339 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 KAT6BQ8WYB5 2073 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
PDPN-202ENST00000376057 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 C4BP0C0L5 1744 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 CDC45O75419 566 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 ANP32AP39687 249 aaKnown RBP13.69□□□□□ -0.22
PDPN-202ENST00000376057 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
PDPN-202ENST00000376057 G3BP1Q13283 466 aaKnown RBP eCLIP13.69□□□□□ -0.22
PDPN-202ENST00000376057 HLFQ16534 295 aa13.69□□□□□ -0.22
PDPN-202ENST00000376057 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
PDPN-202ENST00000376057 GPR108Q9NPR9 543 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 COL24A1Q17RW2 1714 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 HSP90B1P14625 803 aaKnown RBP13.68□□□□□ -0.22
PDPN-202ENST00000376057 A0A0G2JS52 829 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
PDPN-202ENST00000376057 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
PDPN-202ENST00000376057 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
PDPN-202ENST00000376057 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
PDPN-202ENST00000376057 SASH1O94885 1247 aa13.67□□□□□ -0.22
PDPN-202ENST00000376057 SLC27A3Q5K4L6 730 aa13.67□□□□□ -0.22
PDPN-202ENST00000376057 TICAM2Q86XR7 235 aa13.67□□□□□ -0.22
PDPN-202ENST00000376057 LRP5O75197 1615 aa13.67□□□□□ -0.22
PDPN-202ENST00000376057 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
PDPN-202ENST00000376057 LMBR1LQ6UX01 489 aa13.66□□□□□ -0.22
PDPN-202ENST00000376057 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
PDPN-202ENST00000376057 DDX60Q8IY21 1712 aaKnown RBP13.66□□□□□ -0.22
PDPN-202ENST00000376057 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
PDPN-202ENST00000376057 DDRGK1Q96HY6 314 aa13.66□□□□□ -0.22
PDPN-202ENST00000376057 SEC24BO95487 1268 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 SDSP20132 328 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 ADRA2BP18089 450 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
PDPN-202ENST00000376057 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
PDPN-202ENST00000376057 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
PDPN-202ENST00000376057 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.23
PDPN-202ENST00000376057 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 ERC2O15083 957 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 IL15P40933 162 aaPredicted RBP13.64□□□□□ -0.23
PDPN-202ENST00000376057 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
PDPN-202ENST00000376057 PTF1AQ7RTS3 328 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
PDPN-202ENST00000376057 PDE8AO60658 829 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
PDPN-202ENST00000376057 CASC1Q6TDU7 716 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 NARFQ9UHQ1 456 aa13.64□□□□□ -0.23
PDPN-202ENST00000376057 APBB1O00213 710 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 GLRX3O76003 335 aaKnown RBP13.63□□□□□ -0.23
PDPN-202ENST00000376057 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 ATG9AQ7Z3C6 839 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 UTP14AQ9BVJ6 771 aaKnown RBP13.63□□□□□ -0.23
PDPN-202ENST00000376057 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 ZNF330Q9Y3S2 320 aaPredicted RBP13.63□□□□□ -0.23
PDPN-202ENST00000376057 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
PDPN-202ENST00000376057 EYA2O00167 538 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 CTSWP56202 376 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 NTSR2O95665 410 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
PDPN-202ENST00000376057 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
PDPN-202ENST00000376057 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
PDPN-202ENST00000376057 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
PDPN-202ENST00000376057 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
PDPN-202ENST00000376057 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
PDPN-202ENST00000376057 PLSCR1O15162 318 aa13.61□□□□□ -0.23
PDPN-202ENST00000376057 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
PDPN-202ENST00000376057 SUSD4Q5VX71 490 aa13.61□□□□□ -0.23
PDPN-202ENST00000376057 JARID2Q92833 1246 aaPredicted RBP13.61□□□□□ -0.23
PDPN-202ENST00000376057 EAF2Q96CJ1 260 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms