RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IFIT2P09913 472 aaKnown RBP21.99■■□□□ 1.11
HLA-DQB1-201ENST00000374943 TCIRG1Q13488 830 aa21.99■■□□□ 1.11
HLA-DQB1-201ENST00000374943 NBR1Q14596 966 aa21.99■■□□□ 1.11
HLA-DQB1-201ENST00000374943 KIF6Q6ZMV9 814 aa21.99■■□□□ 1.11
HLA-DQB1-201ENST00000374943 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 FOXO4P98177 505 aa21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 PTPN12Q05209 780 aaKnown RBP21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 RABEP1Q15276 862 aa21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 CNTROBQ8N137 903 aa21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 AACSQ86V21 672 aa21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 MARCH10Q8NA82 808 aaPredicted RBP21.98■■□□□ 1.11
HLA-DQB1-201ENST00000374943 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
HLA-DQB1-201ENST00000374943 JARID2Q92833 1246 aaPredicted RBP21.97■■□□□ 1.11
HLA-DQB1-201ENST00000374943 MAP3K15Q6ZN16 1313 aa21.97■■□□□ 1.11
HLA-DQB1-201ENST00000374943 COL5A3P25940 1745 aaPredicted RBP21.96■■□□□ 1.11
HLA-DQB1-201ENST00000374943 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
HLA-DQB1-201ENST00000374943 SYTL4Q96C24 671 aaPredicted RBP21.96■■□□□ 1.11
HLA-DQB1-201ENST00000374943 EAF2Q96CJ1 260 aaPredicted RBP21.96■■□□□ 1.11
HLA-DQB1-201ENST00000374943 SIL1Q9H173 461 aa21.95■■□□□ 1.1
HLA-DQB1-201ENST00000374943 LMBR1LQ6UX01 489 aa21.95■■□□□ 1.1
HLA-DQB1-201ENST00000374943 KLHDC4Q8TBB5 520 aa21.95■■□□□ 1.1
HLA-DQB1-201ENST00000374943 VPS72Q15906 364 aa21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 MEX3CQ5U5Q3 659 aaKnown RBP21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 GIGYF2Q6Y7W6 1299 aaKnown RBP21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 SLKQ9H2G2 1235 aaPredicted RBP21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.94■■□□□ 1.1
HLA-DQB1-201ENST00000374943 THSD7AQ9UPZ6 1657 aa21.93■■□□□ 1.1
HLA-DQB1-201ENST00000374943 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
HLA-DQB1-201ENST00000374943 MYT1Q01538 1121 aa21.93■■□□□ 1.1
HLA-DQB1-201ENST00000374943 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
HLA-DQB1-201ENST00000374943 IL17RAQ96F46 866 aa21.93■■□□□ 1.1
HLA-DQB1-201ENST00000374943 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
HLA-DQB1-201ENST00000374943 MYH14Q7Z406 1995 aaKnown RBP21.92■■□□□ 1.1
HLA-DQB1-201ENST00000374943 K7ELQ4 463 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 NFKBIBQ15653 356 aa21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 PLA2G12BQ9BX93 195 aa21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 ZBTB1Q9Y2K1 713 aa21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 MAP4K4O95819 1239 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 ZNF772Q68DY9 489 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 FNBP4Q8N3X1 1017 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 ZNF330Q9Y3S2 320 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-201ENST00000374943 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
HLA-DQB1-201ENST00000374943 CD2BP2O95400 341 aaKnown RBP21.9■■□□□ 1.1
HLA-DQB1-201ENST00000374943 MCCP23508 829 aa21.9■■□□□ 1.1
HLA-DQB1-201ENST00000374943 ANAPC15P60006 121 aa21.9■■□□□ 1.1
HLA-DQB1-201ENST00000374943 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
HLA-DQB1-201ENST00000374943 CDHR2Q9BYE9 1310 aa21.89■■□□□ 1.1
HLA-DQB1-201ENST00000374943 SGSM2O43147 1006 aa21.89■■□□□ 1.1
HLA-DQB1-201ENST00000374943 TNNI3KQ59H18 835 aa21.89■■□□□ 1.1
HLA-DQB1-201ENST00000374943 CCDC8Q9H0W5 538 aaPredicted RBP21.89■■□□□ 1.1
HLA-DQB1-201ENST00000374943 FPGT-TNNI3KV9GXZ4 949 aa21.89■■□□□ 1.1
HLA-DQB1-201ENST00000374943 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
HLA-DQB1-201ENST00000374943 DDIT3P35638 169 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 GPR108Q9NPR9 543 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ANO2Q9NQ90 1003 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 TLR7Q9NYK1 1049 aaKnown RBP21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CIAO1O76071 339 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 TFCP2Q12800 502 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 NGLY1Q96IV0 654 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 C8orf37Q96NL8 207 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CHMP5Q9NZZ3 219 aa21.88■■□□□ 1.09
HLA-DQB1-201ENST00000374943 SMARCC1Q92922 1105 aaPredicted RBP21.87■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ACSBG1Q96GR2 724 aa21.87■■□□□ 1.09
HLA-DQB1-201ENST00000374943 FBXO3Q9UK99 471 aa21.87■■□□□ 1.09
HLA-DQB1-201ENST00000374943 PALLDQ8WX93 1383 aa21.87■■□□□ 1.09
HLA-DQB1-201ENST00000374943 LAMB2P55268 1798 aa21.87■■□□□ 1.09
HLA-DQB1-201ENST00000374943 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 IL15P40933 162 aaPredicted RBP21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 SIK1P57059 783 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 HLFQ16534 295 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ATG9AQ7Z3C6 839 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 NLRP10Q86W26 655 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 IL27Q8NEV9 243 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 RUFY2Q8WXA3 655 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 IL25Q9H293 177 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 NHSQ6T4R5 1651 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 RAD50Q92878 1312 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 SPEF2Q9C093 1822 aa21.86■■□□□ 1.09
HLA-DQB1-201ENST00000374943 HIP1O00291 1037 aa21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ST18O60284 1047 aa21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 EIF5P55010 431 aaKnown RBP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CCDC87Q9NVE4 849 aa21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 DBNLQ9UJU6 430 aaKnown RBP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ATP5JP18859 108 aa21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 FAM98CQ17RN3 349 aaKnown RBP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 INTS5Q6P9B9 1019 aaKnown RBP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 DIAPH3Q9NSV4 1193 aa21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CIZ1Q9ULV3 898 aaPredicted RBP21.85■■□□□ 1.09
HLA-DQB1-201ENST00000374943 ZNF609O15014 1411 aa21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 BTAF1O14981 1849 aa21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 EYA2O00167 538 aa21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 CSF1RP07333 972 aa21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 DZIP3Q86Y13 1208 aaKnown RBP21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 SPRYD3Q8NCJ5 442 aa21.84■■□□□ 1.09
HLA-DQB1-201ENST00000374943 RFX7Q2KHR2 1363 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms