RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 SASH1O94885 1247 aa20.7■□□□□ 0.9
PTPN20-203ENST00000374342 PI4K2BQ8TCG2 481 aa20.7■□□□□ 0.9
PTPN20-203ENST00000374342 CHMP3Q9Y3E7 222 aa20.7■□□□□ 0.9
PTPN20-203ENST00000374342 IFIT2P09913 472 aaKnown RBP20.69■□□□□ 0.9
PTPN20-203ENST00000374342 RFX5P48382 616 aaPredicted RBP20.69■□□□□ 0.9
PTPN20-203ENST00000374342 FOXO4P98177 505 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 AACSQ86V21 672 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 NHSQ6T4R5 1651 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 BTAF1O14981 1849 aa20.69■□□□□ 0.9
PTPN20-203ENST00000374342 USP42Q9H9J4 1324 aaKnown RBP20.69■□□□□ 0.9
PTPN20-203ENST00000374342 MYH14Q7Z406 1995 aaKnown RBP20.69■□□□□ 0.9
PTPN20-203ENST00000374342 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 MYH3P11055 1940 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 TTC41PQ6P2S7 1318 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 KCNQ2O43526 872 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 SIK1P57059 783 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 GPATCH3Q96I76 525 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 COPRSQ9NQ92 184 aa20.68■□□□□ 0.9
PTPN20-203ENST00000374342 MAP4K4O95819 1239 aaPredicted RBP20.67■□□□□ 0.9
PTPN20-203ENST00000374342 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
PTPN20-203ENST00000374342 PTPN12Q05209 780 aaKnown RBP20.67■□□□□ 0.9
PTPN20-203ENST00000374342 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
PTPN20-203ENST00000374342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.67■□□□□ 0.9
PTPN20-203ENST00000374342 HLFQ16534 295 aa20.66■□□□□ 0.9
PTPN20-203ENST00000374342 CCDC87Q9NVE4 849 aa20.66■□□□□ 0.9
PTPN20-203ENST00000374342 ERC2O15083 957 aa20.66■□□□□ 0.9
PTPN20-203ENST00000374342 TBC1D2Q9BYX2 928 aa20.66■□□□□ 0.9
PTPN20-203ENST00000374342 GPTP24298 496 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 ITPK1Q13572 414 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 DZIP3Q86Y13 1208 aaKnown RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 SMARCC1Q92922 1105 aaPredicted RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 BCORQ6W2J9 1755 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 GLRX3O76003 335 aaKnown RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 REC8O95072 547 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 TRIM28Q13263 835 aaKnown RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 HSP90AB3PQ58FF7 597 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 EAF2Q96CJ1 260 aaPredicted RBP20.65■□□□□ 0.9
PTPN20-203ENST00000374342 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
PTPN20-203ENST00000374342 AFF2P51816 1311 aa20.64■□□□□ 0.9
PTPN20-203ENST00000374342 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.89
PTPN20-203ENST00000374342 PCCAP05165 728 aaPredicted RBP20.63■□□□□ 0.89
PTPN20-203ENST00000374342 CHMLP26374 656 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
PTPN20-203ENST00000374342 CNTROBQ8N137 903 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 ESYT1Q9BSJ8 1104 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
PTPN20-203ENST00000374342 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
PTPN20-203ENST00000374342 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 KIF2CQ99661 725 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 USP26Q9BXU7 913 aa20.63■□□□□ 0.89
PTPN20-203ENST00000374342 NLRP10Q86W26 655 aa20.62■□□□□ 0.89
PTPN20-203ENST00000374342 TFCP2Q12800 502 aa20.61■□□□□ 0.89
PTPN20-203ENST00000374342 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
PTPN20-203ENST00000374342 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
PTPN20-203ENST00000374342 EIF5P55010 431 aaKnown RBP20.61■□□□□ 0.89
PTPN20-203ENST00000374342 HSCBQ8IWL3 235 aa20.61■□□□□ 0.89
PTPN20-203ENST00000374342 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
PTPN20-203ENST00000374342 ATRNO75882 1429 aa20.6■□□□□ 0.89
PTPN20-203ENST00000374342 TNNI3KQ59H18 835 aa20.59■□□□□ 0.89
PTPN20-203ENST00000374342 GJD4Q96KN9 370 aaPredicted RBP20.59■□□□□ 0.89
PTPN20-203ENST00000374342 FPGT-TNNI3KV9GXZ4 949 aa20.59■□□□□ 0.89
PTPN20-203ENST00000374342 CDHR2Q9BYE9 1310 aa20.59■□□□□ 0.89
PTPN20-203ENST00000374342 LAMB2P55268 1798 aa20.58■□□□□ 0.89
PTPN20-203ENST00000374342 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.88
PTPN20-203ENST00000374342 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
PTPN20-203ENST00000374342 UBN2Q6ZU65 1347 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 FAM182BQ5T319 152 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 PTF1AQ7RTS3 328 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 PLA2G12BQ9BX93 195 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 LY75O60449 1722 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 ATG9AQ7Z3C6 839 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
PTPN20-203ENST00000374342 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
PTPN20-203ENST00000374342 DDX60Q8IY21 1712 aaKnown RBP20.56■□□□□ 0.88
PTPN20-203ENST00000374342 NBR1Q14596 966 aa20.56■□□□□ 0.88
PTPN20-203ENST00000374342 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
PTPN20-203ENST00000374342 SLKQ9H2G2 1235 aaPredicted RBP20.56■□□□□ 0.88
PTPN20-203ENST00000374342 ANO2Q9NQ90 1003 aa20.56■□□□□ 0.88
PTPN20-203ENST00000374342 TRMT112Q9UI30 125 aaKnown RBP20.56■□□□□ 0.88
PTPN20-203ENST00000374342 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
PTPN20-203ENST00000374342 ZNF609O15014 1411 aa20.56■□□□□ 0.88
PTPN20-203ENST00000374342 TAF1LQ8IZX4 1826 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 ZNF34Q8IZ26 560 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 SNX21Q969T3 373 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 EYA2O00167 538 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
PTPN20-203ENST00000374342 LRRC24Q50LG9 513 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 IL25Q9H293 177 aa20.55■□□□□ 0.88
PTPN20-203ENST00000374342 TRPC5Q9UL62 973 aaPredicted RBP20.55■□□□□ 0.88
PTPN20-203ENST00000374342 CAMTA2O94983 1202 aa20.54■□□□□ 0.88
PTPN20-203ENST00000374342 KCNQ4P56696 695 aa20.54■□□□□ 0.88
PTPN20-203ENST00000374342 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
PTPN20-203ENST00000374342 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
PTPN20-203ENST00000374342 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
PTPN20-203ENST00000374342 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms