RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 RSPH14Q9UHP6 348 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-201ENST00000373386 REC8O95072 547 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 GNAI3P08754 354 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 PAX7P23759 505 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 DNAJC21Q5F1R6 531 aaKnown RBP9.77□□□□□ -0.85
GARNL3-201ENST00000373386 CCDC30Q5VVM6 783 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 MCM10Q7L590 875 aa9.77□□□□□ -0.85
GARNL3-201ENST00000373386 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.85
GARNL3-201ENST00000373386 CEMIPQ8WUJ3 1361 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 PLEKHG2Q9H7P9 1386 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 ATP2B3Q16720 1220 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 ZNF280DQ6N043 979 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-201ENST00000373386 CCDC125Q86Z20 511 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
GARNL3-201ENST00000373386 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 MST1RQ04912 1400 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
GARNL3-201ENST00000373386 GET4Q7L5D6 327 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-201ENST00000373386 EYA1Q99502 592 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 TSPYL4Q9UJ04 414 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 ADAMTS7Q9UKP4 1686 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 GNAI2P04899 355 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 C11orf91Q3C1V1 193 aa9.76□□□□□ -0.85
GARNL3-201ENST00000373386 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
GARNL3-201ENST00000373386 ABCC6O95255 1503 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 HOXC9P31274 260 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 ZNF445P59923 1031 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 FOXD4Q12950 439 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-201ENST00000373386 H0YHG0 523 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 MCM2P49736 904 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 SARNPP82979 210 aaKnown RBP9.75□□□□□ -0.85
GARNL3-201ENST00000373386 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 STAP2Q9UGK3 403 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 PAXBP1Q9Y5B6 917 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 SLIT3O75094 1523 aa9.75□□□□□ -0.85
GARNL3-201ENST00000373386 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 CYP2E1P05181 493 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-201ENST00000373386 NEFHP12036 1026 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 MEIS3Q99687 375 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 CXorf56Q9H5V9 222 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 SDSP20132 328 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 AMPHP49418 695 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 HDGFL1Q5TGJ6 251 aa9.74□□□□□ -0.85
GARNL3-201ENST00000373386 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
GARNL3-201ENST00000373386 ERC2O15083 957 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 ATP8B2P98198 1209 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 TRDNQ13061 729 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 ST18O60284 1047 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 SF3A1Q15459 793 aaKnown RBP9.73□□□□□ -0.85
GARNL3-201ENST00000373386 CREBRFQ8IUR6 639 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 RAD50Q92878 1312 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-201ENST00000373386 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-201ENST00000373386 ACRBPQ8NEB7 543 aa9.73□□□□□ -0.85
GARNL3-201ENST00000373386 ERCC4Q92889 916 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-201ENST00000373386 SIPA1L3O60292 1781 aaPredicted RBP9.72□□□□□ -0.85
GARNL3-201ENST00000373386 PDE1AP54750 535 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 FLIIQ13045 1269 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 FEZ1Q99689 392 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 RAB11FIP3O75154 756 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 ERCC3P19447 782 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 ZCRB1Q8TBF4 217 aaKnown RBP9.72□□□□□ -0.85
GARNL3-201ENST00000373386 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
GARNL3-201ENST00000373386 SETD1BQ9UPS6 1966 aaKnown RBP9.72□□□□□ -0.85
GARNL3-201ENST00000373386 RBM5P52756 815 aaKnown RBP eCLIP9.71□□□□□ -0.85
GARNL3-201ENST00000373386 CXorf38Q8TB03 319 aa9.71□□□□□ -0.85
GARNL3-201ENST00000373386 LMBRD1Q9NUN5 540 aa9.71□□□□□ -0.85
GARNL3-201ENST00000373386 TPD52L2O43399 206 aaKnown RBP9.71□□□□□ -0.85
GARNL3-201ENST00000373386 KRBA2Q6ZNG9 492 aa9.71□□□□□ -0.85
GARNL3-201ENST00000373386 LRRCC1Q9C099 1032 aa9.71□□□□□ -0.85
GARNL3-201ENST00000373386 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.85
GARNL3-201ENST00000373386 ZSCAN23Q3MJ62 389 aa9.71□□□□□ -0.86
GARNL3-201ENST00000373386 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
GARNL3-201ENST00000373386 KCNH5Q8NCM2 988 aa9.71□□□□□ -0.86
GARNL3-201ENST00000373386 IP6K1Q92551 441 aa9.71□□□□□ -0.86
GARNL3-201ENST00000373386 ABCD1P33897 745 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 CD151P48509 253 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-201ENST00000373386 NLRP6P59044 892 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 PPP2R5AQ15172 486 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
GARNL3-201ENST00000373386 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
GARNL3-201ENST00000373386 USP42Q9H9J4 1324 aaKnown RBP9.7□□□□□ -0.86
GARNL3-201ENST00000373386 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
GARNL3-201ENST00000373386 FOXO3O43524 673 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 POLA2Q14181 598 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms