RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.01□□□□□ -0.33
SYNPO2L-201ENST00000372873 ANKRD44Q8N8A2 993 aa13.01□□□□□ -0.33
SYNPO2L-201ENST00000372873 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
SYNPO2L-201ENST00000372873 RABEP2Q9H5N1 569 aa13.01□□□□□ -0.33
SYNPO2L-201ENST00000372873 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
SYNPO2L-201ENST00000372873 RHOXF2BP0C7M4 288 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
SYNPO2L-201ENST00000372873 RHOXF2Q9BQY4 288 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 YY1AP1Q9H869 796 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 COL17A1Q9UMD9 1497 aaPredicted RBP13□□□□□ -0.33
SYNPO2L-201ENST00000372873 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
SYNPO2L-201ENST00000372873 RAI14Q9P0K7 980 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 ADAM21Q9UKJ8 722 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 CCDC9Q9Y3X0 531 aaKnown RBP13□□□□□ -0.33
SYNPO2L-201ENST00000372873 KDM5CP41229 1560 aa13□□□□□ -0.33
SYNPO2L-201ENST00000372873 INPP5BP32019 993 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 CPA1P15085 419 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 IDI1Q13907 227 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 SLFNL1Q499Z3 407 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 EPB41L2O43491 1005 aaKnown RBP12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 UBASH3AP57075 661 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 MCTP2Q6DN12 878 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 SRLQ86TD4 932 aa12.99□□□□□ -0.33
SYNPO2L-201ENST00000372873 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 FSD1Q9BTV5 496 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 FCHSD2O94868 740 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 CCT4P50991 539 aaKnown RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 ST5P78524 1137 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 NAA25Q14CX7 972 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 GPR161Q8N6U8 529 aaKnown RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 EIF3CLB5ME19 914 aaKnown RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 POLR1AO95602 1720 aaPredicted RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 EIF3CQ99613 913 aaKnown RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 MEIS3Q99687 375 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 IL16Q14005 1332 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 EZRP15311 586 aaKnown RBP12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 ARID5BQ14865 1188 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
SYNPO2L-201ENST00000372873 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 A0A1B0GUA9 196 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 EFCAB8A8MWE9 144 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 SLC3A2P08195 630 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 KARSQ15046 597 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CHMLP26374 656 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 GUCY1B3Q02153 619 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CCDC158Q5M9N0 1113 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
SYNPO2L-201ENST00000372873 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 ATP8B1O43520 1251 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 FILIP1LQ4L180 1135 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 HSP90AA4PQ58FG1 418 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 PLEKHA4Q9H4M7 779 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 F6X3S4 739 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
SYNPO2L-201ENST00000372873 PLA2R1Q13018 1463 aa12.96□□□□□ -0.34
SYNPO2L-201ENST00000372873 USP27XA6NNY8 438 aa12.96□□□□□ -0.34
SYNPO2L-201ENST00000372873 CDK19Q9BWU1 502 aa12.96□□□□□ -0.34
SYNPO2L-201ENST00000372873 ATAD2Q6PL18 1390 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 EFCAB13Q8IY85 973 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 PCMTD1Q96MG8 357 aaPredicted RBP12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 MCM3P25205 808 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 CUL4AQ13619 759 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC30Q5VVM6 783 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms