RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 FOXD4L5Q5VV16 416 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-204ENST00000372064 NBPF10Q6P3W6 841 aaKnown RBP24.83■■□□□ 1.57
VEGFA-204ENST00000372064 NBPF15Q8N660 670 aa24.83■■□□□ 1.57
VEGFA-204ENST00000372064 FOXD4L4Q8WXT5 416 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-204ENST00000372064 HIP1O00291 1037 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 PTH1RQ03431 593 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 RABL6Q3YEC7 729 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-204ENST00000372064 PRPF40AO75400 957 aaKnown RBP24.82■■□□□ 1.56
VEGFA-204ENST00000372064 RFX5P48382 616 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-204ENST00000372064 PLBD2Q8NHP8 589 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 CHAMP1Q96JM3 812 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 A0A087WZG4 1122 aa24.82■■□□□ 1.56
VEGFA-204ENST00000372064 BOLA2Q9H3K6 86 aa24.81■■□□□ 1.56
VEGFA-204ENST00000372064 PAPPAQ13219 1627 aa24.81■■□□□ 1.56
VEGFA-204ENST00000372064 GPT2Q8TD30 523 aa24.81■■□□□ 1.56
VEGFA-204ENST00000372064 AK2P54819 239 aa24.8■■□□□ 1.56
VEGFA-204ENST00000372064 DDX54Q8TDD1 881 aaKnown RBP24.8■■□□□ 1.56
VEGFA-204ENST00000372064 STRN4Q9NRL3 753 aa24.8■■□□□ 1.56
VEGFA-204ENST00000372064 STRCQ7RTU9 1775 aa24.8■■□□□ 1.56
VEGFA-204ENST00000372064 IL2RBP14784 551 aa24.8■■□□□ 1.56
VEGFA-204ENST00000372064 PTPN12Q05209 780 aaKnown RBP24.8■■□□□ 1.56
VEGFA-204ENST00000372064 ERVV-2B6SEH9 535 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 TM6SF1Q9BZW5 370 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 CCDC171Q6TFL3 1326 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 CAVIN1Q6NZI2 390 aaKnown RBP24.79■■□□□ 1.56
VEGFA-204ENST00000372064 CARD10Q9BWT7 1032 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 CASP7P55210 303 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 NECTIN1Q15223 517 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 ZSCAN23Q3MJ62 389 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 RUFY3Q7L099 469 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 FAM227BQ96M60 508 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 LIMCH1Q9UPQ0 1083 aa24.79■■□□□ 1.56
VEGFA-204ENST00000372064 ABCA3Q99758 1704 aa24.78■■□□□ 1.56
VEGFA-204ENST00000372064 TTLL7Q6ZT98 887 aa24.78■■□□□ 1.56
VEGFA-204ENST00000372064 KCPQ6ZWJ8 1503 aa24.78■■□□□ 1.56
VEGFA-204ENST00000372064 A1BGP04217 495 aa24.77■■□□□ 1.56
VEGFA-204ENST00000372064 NKX1-1Q15270 411 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-204ENST00000372064 NUP188Q5SRE5 1749 aa24.77■■□□□ 1.56
VEGFA-204ENST00000372064 RPAP1Q9BWH6 1393 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-204ENST00000372064 NMIQ13287 307 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-204ENST00000372064 CPA1P15085 419 aa24.76■■□□□ 1.55
VEGFA-204ENST00000372064 CASTP20810 708 aaKnown RBP24.76■■□□□ 1.55
VEGFA-204ENST00000372064 PRPF40BQ6NWY9 871 aaKnown RBP24.76■■□□□ 1.55
VEGFA-204ENST00000372064 ZSWIM6Q9HCJ5 1215 aa24.76■■□□□ 1.55
VEGFA-204ENST00000372064 SHANK3Q9BYB0 1731 aa24.76■■□□□ 1.55
VEGFA-204ENST00000372064 VPS53Q5VIR6 699 aa24.76■■□□□ 1.55
VEGFA-204ENST00000372064 MAP4K1Q92918 833 aa24.76■■□□□ 1.55
VEGFA-204ENST00000372064 LARP6Q9BRS8 491 aaKnown RBP24.76■■□□□ 1.55
VEGFA-204ENST00000372064 WDR33Q9C0J8 1336 aaKnown RBP24.76■■□□□ 1.55
VEGFA-204ENST00000372064 NCLP19338 710 aaKnown RBP24.75■■□□□ 1.55
VEGFA-204ENST00000372064 TFCP2Q12800 502 aa24.75■■□□□ 1.55
VEGFA-204ENST00000372064 FSD1Q9BTV5 496 aa24.75■■□□□ 1.55
VEGFA-204ENST00000372064 RRAGDQ9NQL2 400 aaPredicted RBP24.75■■□□□ 1.55
VEGFA-204ENST00000372064 MED23Q9ULK4 1368 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 EVA1CP58658 441 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 ADCK5Q3MIX3 580 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 DBNLQ9UJU6 430 aaKnown RBP24.74■■□□□ 1.55
VEGFA-204ENST00000372064 JCADQ9P266 1359 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 TNNI3KQ59H18 835 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 LMBR1LQ6UX01 489 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 FPGT-TNNI3KV9GXZ4 949 aa24.74■■□□□ 1.55
VEGFA-204ENST00000372064 RBM8AQ9Y5S9 174 aaKnown RBP24.73■■□□□ 1.55
VEGFA-204ENST00000372064 A0A0D9SFI3 127 aa24.73■■□□□ 1.55
VEGFA-204ENST00000372064 KDM4FA0A1W2PPD8 638 aa24.73■■□□□ 1.55
VEGFA-204ENST00000372064 MBD3O95983 291 aa24.73■■□□□ 1.55
VEGFA-204ENST00000372064 ATP5JP18859 108 aa24.73■■□□□ 1.55
VEGFA-204ENST00000372064 EDC3Q96F86 508 aaKnown RBP24.73■■□□□ 1.55
VEGFA-204ENST00000372064 JAKMIP1Q96N16 626 aaKnown RBP24.73■■□□□ 1.55
VEGFA-204ENST00000372064 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-204ENST00000372064 TNS2Q63HR2 1409 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 H7C1W4 665 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 CREB3L3Q68CJ9 461 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 TJP1Q07157 1748 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 PDRG1Q9NUG6 133 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 CYP46A1Q9Y6A2 500 aa24.72■■□□□ 1.55
VEGFA-204ENST00000372064 ZKSCAN1P17029 563 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-204ENST00000372064 ZBTB3Q9H5J0 574 aa24.71■■□□□ 1.55
VEGFA-204ENST00000372064 FOXO4P98177 505 aa24.71■■□□□ 1.55
VEGFA-204ENST00000372064 CHMP3Q9Y3E7 222 aa24.71■■□□□ 1.55
VEGFA-204ENST00000372064 RFX7Q2KHR2 1363 aa24.7■■□□□ 1.55
VEGFA-204ENST00000372064 NASPP49321 788 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-204ENST00000372064 CWC25Q9NXE8 425 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-204ENST00000372064 NSFL1CQ9UNZ2 370 aaKnown RBP24.7■■□□□ 1.54
VEGFA-204ENST00000372064 TMEM63CQ9P1W3 806 aa24.7■■□□□ 1.54
VEGFA-204ENST00000372064 RBM27Q9P2N5 1060 aaKnown RBP24.7■■□□□ 1.54
VEGFA-204ENST00000372064 KCNJ4P48050 445 aa24.69■■□□□ 1.54
VEGFA-204ENST00000372064 ZSCAN31Q96LW9 406 aaPredicted RBP24.69■■□□□ 1.54
VEGFA-204ENST00000372064 LARGE1O95461 756 aa24.69■■□□□ 1.54
VEGFA-204ENST00000372064 DBNDD2Q9BQY9 259 aa24.69■■□□□ 1.54
VEGFA-204ENST00000372064 SH2B1Q9NRF2 756 aaPredicted RBP24.69■■□□□ 1.54
VEGFA-204ENST00000372064 SLC27A2O14975 620 aa24.68■■□□□ 1.54
VEGFA-204ENST00000372064 NDUFB9Q9Y6M9 179 aa24.68■■□□□ 1.54
VEGFA-204ENST00000372064 PPP1R9BQ96SB3 815 aa24.67■■□□□ 1.54
VEGFA-204ENST00000372064 ZNF589Q86UQ0 364 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-204ENST00000372064 ZSCAN22P10073 491 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-204ENST00000372064 TMEM87AQ8NBN3 555 aa24.66■■□□□ 1.54
VEGFA-204ENST00000372064 CCDC173Q0VFZ6 552 aa24.66■■□□□ 1.54
VEGFA-204ENST00000372064 FOXD4L6Q3SYB3 417 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-204ENST00000372064 FOXD4L3Q6VB84 417 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms