RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
LDB3-203ENST00000372056 H7C1W4 665 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 RAB11FIP3O75154 756 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 CDC45O75419 566 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
LDB3-203ENST00000372056 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 ZBTB3Q9H5J0 574 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
LDB3-203ENST00000372056 RGS17Q9UGC6 210 aaPredicted RBP15.97■□□□□ 0.15
LDB3-203ENST00000372056 RTCBQ9Y3I0 505 aaKnown RBP15.97■□□□□ 0.15
LDB3-203ENST00000372056 SRGAP3O43295 1099 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 SLC4A3P48751 1232 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 SALL3Q9BXA9 1300 aa15.97■□□□□ 0.15
LDB3-203ENST00000372056 TRIM37O94972 964 aa15.96■□□□□ 0.15
LDB3-203ENST00000372056 PDE1AP54750 535 aa15.96■□□□□ 0.15
LDB3-203ENST00000372056 FAM182BQ5T319 152 aa15.96■□□□□ 0.15
LDB3-203ENST00000372056 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
LDB3-203ENST00000372056 ARXQ96QS3 562 aa15.96■□□□□ 0.15
LDB3-203ENST00000372056 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.15
LDB3-203ENST00000372056 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
LDB3-203ENST00000372056 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
LDB3-203ENST00000372056 ERC1Q8IUD2 1116 aa15.95■□□□□ 0.14
LDB3-203ENST00000372056 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
LDB3-203ENST00000372056 CDHR2Q9BYE9 1310 aa15.94■□□□□ 0.14
LDB3-203ENST00000372056 SDSP20132 328 aa15.94■□□□□ 0.14
LDB3-203ENST00000372056 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
LDB3-203ENST00000372056 TAF1LQ8IZX4 1826 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
LDB3-203ENST00000372056 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 SURF6O75683 361 aaKnown RBP15.93■□□□□ 0.14
LDB3-203ENST00000372056 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 ZPR1O75312 459 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 MX1P20591 662 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 BECN1Q14457 450 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 RABL6Q3YEC7 729 aaPredicted RBP15.93■□□□□ 0.14
LDB3-203ENST00000372056 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
LDB3-203ENST00000372056 EIF5BO60841 1220 aaKnown RBP15.92■□□□□ 0.14
LDB3-203ENST00000372056 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 SSFA2P28290 1259 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 KAZALD1Q96I82 304 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 SUCLG2Q96I99 432 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 STAP2Q9UGK3 403 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 TBC1D2BQ9UPU7 963 aa15.92■□□□□ 0.14
LDB3-203ENST00000372056 MYH14Q7Z406 1995 aaKnown RBP15.92■□□□□ 0.14
LDB3-203ENST00000372056 NUP98P52948 1817 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 APBA3O96018 575 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 CASP7P55210 303 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 PTF1AQ7RTS3 328 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 NLRP10Q86W26 655 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 RHPN1Q8TCX5 695 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 GNPATO15228 680 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 CCDC125Q86Z20 511 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
LDB3-203ENST00000372056 AOX1Q06278 1338 aa15.9■□□□□ 0.14
LDB3-203ENST00000372056 NYXQ9GZU5 481 aa15.9■□□□□ 0.14
LDB3-203ENST00000372056 BICC1Q9H694 974 aaKnown RBP15.9■□□□□ 0.14
LDB3-203ENST00000372056 IL1RAPL2Q9NP60 686 aa15.9■□□□□ 0.14
LDB3-203ENST00000372056 RFC4P35249 363 aa15.89■□□□□ 0.13
LDB3-203ENST00000372056 SF3B2Q13435 895 aaKnown RBP15.89■□□□□ 0.13
LDB3-203ENST00000372056 HLFQ16534 295 aa15.89■□□□□ 0.13
LDB3-203ENST00000372056 TSHZ3Q63HK5 1081 aa15.89■□□□□ 0.13
LDB3-203ENST00000372056 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.13
LDB3-203ENST00000372056 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
LDB3-203ENST00000372056 TRMT112Q9UI30 125 aaKnown RBP15.88■□□□□ 0.13
LDB3-203ENST00000372056 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
LDB3-203ENST00000372056 G3BP1Q13283 466 aaKnown RBP eCLIP15.88■□□□□ 0.13
LDB3-203ENST00000372056 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
LDB3-203ENST00000372056 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
LDB3-203ENST00000372056 COPRSQ9NQ92 184 aa15.88■□□□□ 0.13
LDB3-203ENST00000372056 SH3TC1Q8TE82 1336 aa15.87■□□□□ 0.13
LDB3-203ENST00000372056 PDE8AO60658 829 aa15.86■□□□□ 0.13
LDB3-203ENST00000372056 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
LDB3-203ENST00000372056 OS9Q13438 667 aaPredicted RBP15.86■□□□□ 0.13
LDB3-203ENST00000372056 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
LDB3-203ENST00000372056 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
LDB3-203ENST00000372056 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
LDB3-203ENST00000372056 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
LDB3-203ENST00000372056 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
LDB3-203ENST00000372056 SCN7AQ01118 1682 aa15.85■□□□□ 0.13
LDB3-203ENST00000372056 CSF1RP07333 972 aa15.85■□□□□ 0.13
LDB3-203ENST00000372056 FOXO4P98177 505 aa15.85■□□□□ 0.13
LDB3-203ENST00000372056 EPHA10Q5JZY3 1008 aa15.85■□□□□ 0.13
LDB3-203ENST00000372056 KIF2CQ99661 725 aa15.85■□□□□ 0.13
LDB3-203ENST00000372056 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
LDB3-203ENST00000372056 CCDC57Q2TAC2 916 aa15.84■□□□□ 0.13
LDB3-203ENST00000372056 LMBR1LQ6UX01 489 aa15.84■□□□□ 0.13
LDB3-203ENST00000372056 IRS4O14654 1257 aaPredicted RBP15.84■□□□□ 0.13
LDB3-203ENST00000372056 GPTP24298 496 aa15.84■□□□□ 0.13
LDB3-203ENST00000372056 BAG6P46379 1132 aa15.84■□□□□ 0.13
LDB3-203ENST00000372056 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
LDB3-203ENST00000372056 CLASRPQ8N2M8 674 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms