RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 MCM10Q7L590 875 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 MYD88Q99836 296 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 TBC1D2Q9BYX2 928 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 KIF3CO14782 793 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 ZSCAN23Q3MJ62 389 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 EXOC1Q9NV70 894 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
HCFC1-202ENST00000369984 RAD54L2Q9Y4B4 1467 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 UBASH3AP57075 661 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 APBB1IPQ7Z5R6 666 aaPredicted RBP14.25□□□□□ -0.13
HCFC1-202ENST00000369984 SELENOOQ9BVL4 669 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 IQCGQ9H095 443 aaKnown RBP14.25□□□□□ -0.13
HCFC1-202ENST00000369984 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 PLVAPQ9BX97 442 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 MMRN2Q9H8L6 949 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 KIF5BP33176 963 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC172P0C7W6 258 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 SAMM50Q9Y512 469 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 RASAL2Q9UJF2 1139 aa14.25□□□□□ -0.13
HCFC1-202ENST00000369984 CAVIN2O95810 425 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-202ENST00000369984 CTAGE9A4FU28 777 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 MCM6Q14566 821 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 EVI5LQ96CN4 794 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 SYNCQ9H7C4 482 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
HCFC1-202ENST00000369984 UBE2Q2Q8WVN8 375 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-202ENST00000369984 TTC16Q8NEE8 873 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-202ENST00000369984 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 FAM184BQ9ULE4 1060 aa14.24□□□□□ -0.13
HCFC1-202ENST00000369984 SLF2Q8IX21 1173 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 EFCAB5A4FU69 1503 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
HCFC1-202ENST00000369984 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■□□□ 14.2
HCFC1-202ENST00000369984 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 CTAGE1Q96RT6 745 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 CEP83Q9Y592 693 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 UBA7P41226 1012 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 RSPH14Q9UHP6 348 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
HCFC1-202ENST00000369984 ARL1P40616 181 aaPredicted RBP14.23□□□□□ -0.13
HCFC1-202ENST00000369984 METAP2P50579 478 aaKnown RBP eCLIP14.23□□□□□ -0.137e-7■■■■□ 22.1
HCFC1-202ENST00000369984 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 IDEP14735 1019 aa14.23□□□□□ -0.13
HCFC1-202ENST00000369984 GOLIM4O00461 696 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 UVSSAQ2YD98 709 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 BICD1Q96G01 975 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
HCFC1-202ENST00000369984 RMND1Q9NWS8 449 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 WDR78Q5VTH9 848 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 TBC1D9Q6ZT07 1266 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 N4BP3O15049 544 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC174Q6PII3 467 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
HCFC1-202ENST00000369984 SLU7O95391 586 aaKnown RBP14.22□□□□□ -0.13
HCFC1-202ENST00000369984 STMN4Q9H169 189 aaPredicted RBP14.22□□□□□ -0.13
HCFC1-202ENST00000369984 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
HCFC1-202ENST00000369984 ANO6Q4KMQ2 910 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 CEP57Q86XR8 500 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 ZSCAN16Q9H4T2 348 aaPredicted RBP14.21□□□□□ -0.13
HCFC1-202ENST00000369984 SYKP43405 635 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 VAT1LQ9HCJ6 419 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 IARSP41252 1262 aaKnown RBP14.21□□□□□ -0.13
HCFC1-202ENST00000369984 RARSP54136 660 aaKnown RBP14.21□□□□□ -0.13
HCFC1-202ENST00000369984 STAT6P42226 847 aa14.21□□□□□ -0.13
HCFC1-202ENST00000369984 TTF1Q15361 905 aaPredicted RBP14.21□□□□□ -0.13
HCFC1-202ENST00000369984 TMCO4Q5TGY1 634 aa14.21□□□□□ -0.14
HCFC1-202ENST00000369984 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.14
HCFC1-202ENST00000369984 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.14
HCFC1-202ENST00000369984 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.14
HCFC1-202ENST00000369984 NOL3O60936 208 aaKnown RBP14.21□□□□□ -0.14
HCFC1-202ENST00000369984 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.14
HCFC1-202ENST00000369984 CFAP58Q5T655 872 aa14.21□□□□□ -0.14
HCFC1-202ENST00000369984 LRRC45Q96CN5 670 aa14.21□□□□□ -0.14
HCFC1-202ENST00000369984 SLC26A6Q9BXS9 759 aa14.21□□□□□ -0.14
HCFC1-202ENST00000369984 PSMC4P43686 418 aa14.2□□□□□ -0.14
HCFC1-202ENST00000369984 LRRC27Q9C0I9 530 aa14.2□□□□□ -0.14
HCFC1-202ENST00000369984 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
HCFC1-202ENST00000369984 PTPRCP08575 1304 aa14.2□□□□□ -0.14
HCFC1-202ENST00000369984 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
HCFC1-202ENST00000369984 LRSAM1Q6UWE0 723 aa14.2□□□□□ -0.14
HCFC1-202ENST00000369984 RPGRQ92834 1020 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms