RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ZRSR2Q15696 482 aaKnown RBP18.38■□□□□ 0.53
COL17A1-202ENST00000369733 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
COL17A1-202ENST00000369733 TUBB4AP04350 444 aa18.38■□□□□ 0.53
COL17A1-202ENST00000369733 LIG1P18858 919 aa18.38■□□□□ 0.53
COL17A1-202ENST00000369733 NAPBQ9H115 298 aa18.38■□□□□ 0.53
COL17A1-202ENST00000369733 ARHGEF12Q9NZN5 1544 aa18.38■□□□□ 0.53
COL17A1-202ENST00000369733 GOLIM4O00461 696 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 SRRTQ9BXP5 876 aaKnown RBP18.37■□□□□ 0.53
COL17A1-202ENST00000369733 SYKP43405 635 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 GPATCH11Q8N954 259 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 LUZP1Q86V48 1076 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 SYT1P21579 422 aa18.37■□□□□ 0.53
COL17A1-202ENST00000369733 COL17A1Q9UMD9 1497 aaPredicted RBP18.37■□□□□ 0.53
COL17A1-202ENST00000369733 MYRIPQ8NFW9 859 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
COL17A1-202ENST00000369733 IVLP07476 585 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
COL17A1-202ENST00000369733 RAB11FIP4Q86YS3 637 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 LRRC2Q9BYS8 371 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
COL17A1-202ENST00000369733 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
COL17A1-202ENST00000369733 MCM6Q14566 821 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 DNA2P51530 1060 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
COL17A1-202ENST00000369733 CHMLP26374 656 aa18.35■□□□□ 0.53
COL17A1-202ENST00000369733 NPHP3Q7Z494 1330 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 HAND2P61296 217 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 AMOTQ4VCS5 1084 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 KANK3Q6NY19 840 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
COL17A1-202ENST00000369733 RIOK3O14730 519 aaKnown RBP18.33■□□□□ 0.53
COL17A1-202ENST00000369733 Q6ZUG5 572 aa18.33■□□□□ 0.53
COL17A1-202ENST00000369733 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
COL17A1-202ENST00000369733 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.53
COL17A1-202ENST00000369733 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.53
COL17A1-202ENST00000369733 IDI1Q13907 227 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 RSPH14Q9UHP6 348 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 CTAGE15A4D2H0 777 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 CTAGE8P0CG41 777 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL17A1-202ENST00000369733 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 CTAGE6Q86UF2 777 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 CTAGE4Q8IX94 777 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 STRN4Q9NRL3 753 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL17A1-202ENST00000369733 ALS2CR12Q96Q35 445 aa18.33■□□□□ 0.52
COL17A1-202ENST00000369733 INSRP06213 1382 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 ITSN2Q9NZM3 1697 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 A0A087WZG4 1122 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 HSP90AA4PQ58FG1 418 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 C17orf53Q8N3J3 647 aaPredicted RBP18.32■□□□□ 0.52
COL17A1-202ENST00000369733 DYDC1Q8WWB3 177 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 ADGRL1O94910 1474 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
COL17A1-202ENST00000369733 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
COL17A1-202ENST00000369733 ABCF2Q9UG63 623 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 RTL1A6NKG5 1358 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 NCOA7Q8NI08 942 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
COL17A1-202ENST00000369733 GOLGA1Q92805 767 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 CCDC113Q9H0I3 377 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
COL17A1-202ENST00000369733 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 GTF2A1P52655 376 aaPredicted RBP18.31■□□□□ 0.52
COL17A1-202ENST00000369733 MICU3Q86XE3 530 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 TSG101Q99816 390 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
COL17A1-202ENST00000369733 TEX14Q8IWB6 1497 aa18.31■□□□□ 0.52
COL17A1-202ENST00000369733 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL17A1-202ENST00000369733 LMOD1P29536 600 aaPredicted RBP18.31■□□□□ 0.52
COL17A1-202ENST00000369733 TDRD12Q587J7 1177 aaKnown RBP18.31■□□□□ 0.52
COL17A1-202ENST00000369733 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 N4BP3O15049 544 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 NAA15Q9BXJ9 866 aaKnown RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 ANKRD62A6NC57 917 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 MNAT1P51948 309 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 TMEM67Q5HYA8 995 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 PROSER2Q86WR7 435 aaPredicted RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
COL17A1-202ENST00000369733 CAPN2P17655 700 aa18.3■□□□□ 0.52
COL17A1-202ENST00000369733 ANXA1P04083 346 aa18.29■□□□□ 0.52
COL17A1-202ENST00000369733 EHBP1Q8NDI1 1231 aa18.29■□□□□ 0.52
COL17A1-202ENST00000369733 KIF20AO95235 890 aa18.29■□□□□ 0.52
COL17A1-202ENST00000369733 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms