RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
PRUNE1-203ENST00000368935 G3BP1Q13283 466 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 EAF2Q96CJ1 260 aaPredicted RBP11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
PRUNE1-203ENST00000368935 KCNJ4P48050 445 aa11.9□□□□□ -0.51
PRUNE1-203ENST00000368935 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.51
PRUNE1-203ENST00000368935 ME3Q16798 604 aa11.9□□□□□ -0.51
PRUNE1-203ENST00000368935 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.51
PRUNE1-203ENST00000368935 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 DNM1Q05193 864 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 DDX54Q8TDD1 881 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 MAP4K1Q92918 833 aa11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 CCDC8Q9H0W5 538 aaPredicted RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 USP25Q9UHP3 1055 aa11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
PRUNE1-203ENST00000368935 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 DTNBO60941 627 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 PDIA6Q15084 440 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 SIL1Q9H173 461 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 SNRKQ9NRH2 765 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 KIF1AQ12756 1690 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 NPHP4O75161 1426 aaPredicted RBP11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 SLC27A2O14975 620 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 KIAA2012Q0VF49 1180 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
PRUNE1-203ENST00000368935 IGKV5-2P06315 115 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 PSMA5P28066 241 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 JCADQ9P266 1359 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 UQCRHLA0A096LP55 91 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 UQCRHP07919 91 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 FUCA2Q9BTY2 467 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 ERBB3P21860 1342 aa11.87□□□□□ -0.51
PRUNE1-203ENST00000368935 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 ADCY5O95622 1261 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 RNF20Q5VTR2 975 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 ALS2Q96Q42 1657 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 GIMAP6Q6P9H5 292 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 BLOC1S2Q6QNY1 142 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
PRUNE1-203ENST00000368935 MYL6BP14649 208 aa11.85□□□□□ -0.51
PRUNE1-203ENST00000368935 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
PRUNE1-203ENST00000368935 GCKRQ14397 625 aa11.85□□□□□ -0.51
PRUNE1-203ENST00000368935 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
PRUNE1-203ENST00000368935 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
PRUNE1-203ENST00000368935 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 PDCP20941 246 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 KRT85P78386 507 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 ZNF589Q86UQ0 364 aaPredicted RBP11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 MYD88Q99836 296 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 TAF6LQ9Y6J9 622 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 FERMT3Q86UX7 667 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 MPNDQ8N594 471 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 METTL22Q9BUU2 404 aaPredicted RBP11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
PRUNE1-203ENST00000368935 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 ELP1O95163 1332 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 KDM4AO75164 1064 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 MEGF6O75095 1541 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 MST1RQ04912 1400 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 ZNF830Q96NB3 372 aaPredicted RBP11.83□□□□□ -0.52
PRUNE1-203ENST00000368935 ABCC6O95255 1503 aa11.82□□□□□ -0.52
PRUNE1-203ENST00000368935 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms