RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ZCRB1Q8TBF4 217 aaKnown RBP21■□□□□ 0.95
TRIM11-202ENST00000366699 RBSNQ9H1K0 784 aa20.99■□□□□ 0.95
TRIM11-202ENST00000366699 COPRSQ9NQ92 184 aa20.99■□□□□ 0.95
TRIM11-202ENST00000366699 ERVV-2B6SEH9 535 aa20.99■□□□□ 0.95
TRIM11-202ENST00000366699 SIL1Q9H173 461 aa20.99■□□□□ 0.95
TRIM11-202ENST00000366699 LIMCH1Q9UPQ0 1083 aa20.99■□□□□ 0.95
TRIM11-202ENST00000366699 RASEFQ8IZ41 740 aa20.98■□□□□ 0.95
TRIM11-202ENST00000366699 CCDC8Q9H0W5 538 aaPredicted RBP20.98■□□□□ 0.95
TRIM11-202ENST00000366699 TCHHQ07283 1943 aa20.98■□□□□ 0.95
TRIM11-202ENST00000366699 ZKSCAN1P17029 563 aaPredicted RBP20.97■□□□□ 0.95
TRIM11-202ENST00000366699 AK2P54819 239 aa20.97■□□□□ 0.95
TRIM11-202ENST00000366699 SYAP1Q96A49 352 aaPredicted RBP20.97■□□□□ 0.95
TRIM11-202ENST00000366699 NSFL1CQ9UNZ2 370 aaKnown RBP20.97■□□□□ 0.95
TRIM11-202ENST00000366699 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.97■□□□□ 0.95
TRIM11-202ENST00000366699 TM6SF1Q9BZW5 370 aa20.97■□□□□ 0.95
TRIM11-202ENST00000366699 RABL6Q3YEC7 729 aaPredicted RBP20.96■□□□□ 0.95
TRIM11-202ENST00000366699 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
TRIM11-202ENST00000366699 SYCE3A1L190 88 aa20.96■□□□□ 0.95
TRIM11-202ENST00000366699 KCNB2Q92953 911 aa20.96■□□□□ 0.95
TRIM11-202ENST00000366699 PARP4Q9UKK3 1724 aaKnown RBP20.95■□□□□ 0.94
TRIM11-202ENST00000366699 A0A087WZG4 1122 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 EPHA10Q5JZY3 1008 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 UBE3BQ7Z3V4 1068 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 CCDC171Q6TFL3 1326 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 CASTP20810 708 aaKnown RBP20.95■□□□□ 0.94
TRIM11-202ENST00000366699 HS1BP3Q53T59 392 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 SLAIN2Q9P270 581 aa20.95■□□□□ 0.94
TRIM11-202ENST00000366699 VPS53Q5VIR6 699 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 RUFY3Q7L099 469 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 ZSCAN30Q86W11 494 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 FSD1Q9BTV5 496 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 SNRKQ9NRH2 765 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 IL2RBP14784 551 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 KCNJ4P48050 445 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 BOLA2Q9H3K6 86 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
TRIM11-202ENST00000366699 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
TRIM11-202ENST00000366699 PTH1RQ03431 593 aa20.93■□□□□ 0.94
TRIM11-202ENST00000366699 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
TRIM11-202ENST00000366699 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
TRIM11-202ENST00000366699 KLHDC4Q8TBB5 520 aa20.93■□□□□ 0.94
TRIM11-202ENST00000366699 ZSCAN31Q96LW9 406 aaPredicted RBP20.93■□□□□ 0.94
TRIM11-202ENST00000366699 CARD10Q9BWT7 1032 aa20.93■□□□□ 0.94
TRIM11-202ENST00000366699 RPAP1Q9BWH6 1393 aaPredicted RBP20.93■□□□□ 0.94
TRIM11-202ENST00000366699 RNF20Q5VTR2 975 aa20.93■□□□□ 0.94
TRIM11-202ENST00000366699 PDLIM2Q96JY6 352 aa20.93■□□□□ 0.94
TRIM11-202ENST00000366699 PSMA5P28066 241 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 RFX5P48382 616 aaPredicted RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 PTPN12Q05209 780 aaKnown RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 NMIQ13287 307 aaPredicted RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 NECTIN1Q15223 517 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 NAP1L5Q96NT1 182 aaPredicted RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 ZSWIM6Q9HCJ5 1215 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 PDRG1Q9NUG6 133 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 ATP5J2-PTCD1G3V325 749 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 PHF14O94880 888 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 TMEM87AQ8NBN3 555 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 MAP4K1Q92918 833 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
TRIM11-202ENST00000366699 SMC3Q9UQE7 1217 aa20.92■□□□□ 0.94
TRIM11-202ENST00000366699 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
TRIM11-202ENST00000366699 ZSCAN22P10073 491 aaPredicted RBP20.91■□□□□ 0.94
TRIM11-202ENST00000366699 ATP5JP18859 108 aa20.91■□□□□ 0.94
TRIM11-202ENST00000366699 TNNI3KQ59H18 835 aa20.91■□□□□ 0.94
TRIM11-202ENST00000366699 USP48Q86UV5 1035 aa20.91■□□□□ 0.94
TRIM11-202ENST00000366699 SH2B1Q9NRF2 756 aaPredicted RBP20.91■□□□□ 0.94
TRIM11-202ENST00000366699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.91■□□□□ 0.94
TRIM11-202ENST00000366699 FPGT-TNNI3KV9GXZ4 949 aa20.91■□□□□ 0.94
TRIM11-202ENST00000366699 COL5A2P05997 1499 aaPredicted RBP20.91■□□□□ 0.94
TRIM11-202ENST00000366699 ATP6V1DQ9Y5K8 247 aa20.91■□□□□ 0.94
TRIM11-202ENST00000366699 STX6O43752 255 aa20.9■□□□□ 0.94
TRIM11-202ENST00000366699 RBM8AQ9Y5S9 174 aaKnown RBP20.9■□□□□ 0.94
TRIM11-202ENST00000366699 STRCQ7RTU9 1775 aa20.9■□□□□ 0.94
TRIM11-202ENST00000366699 LAMB4A4D0S4 1761 aa20.9■□□□□ 0.94
TRIM11-202ENST00000366699 FAM227BQ96M60 508 aa20.89■□□□□ 0.94
TRIM11-202ENST00000366699 CWC25Q9NXE8 425 aaPredicted RBP20.89■□□□□ 0.94
TRIM11-202ENST00000366699 XIRP1Q702N8 1843 aaKnown RBP20.89■□□□□ 0.93
TRIM11-202ENST00000366699 TFCP2Q12800 502 aa20.89■□□□□ 0.93
TRIM11-202ENST00000366699 CREB3L3Q68CJ9 461 aa20.89■□□□□ 0.93
TRIM11-202ENST00000366699 H7C1W4 665 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 SYT1P21579 422 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 MSNP26038 577 aaKnown RBP20.88■□□□□ 0.93
TRIM11-202ENST00000366699 CASP7P55210 303 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 EVA1CP58658 441 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 FOXD4L6Q3SYB3 417 aaPredicted RBP20.88■□□□□ 0.93
TRIM11-202ENST00000366699 FOXD4L3Q6VB84 417 aaPredicted RBP20.88■□□□□ 0.93
TRIM11-202ENST00000366699 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
TRIM11-202ENST00000366699 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 GDPD2Q9HCC8 539 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 RFX7Q2KHR2 1363 aa20.88■□□□□ 0.93
TRIM11-202ENST00000366699 ADCK5Q3MIX3 580 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 UBE2Q2Q8WVN8 375 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 JARID2Q92833 1246 aaPredicted RBP20.87■□□□□ 0.93
TRIM11-202ENST00000366699 TSPY26PQ9H489 355 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 GADD45BO75293 160 aaPredicted RBP20.87■□□□□ 0.93
TRIM11-202ENST00000366699 PDIA4P13667 645 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms