RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
GTF3C2-202ENST00000359541 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
GTF3C2-202ENST00000359541 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
GTF3C2-202ENST00000359541 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.63
GTF3C2-202ENST00000359541 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.63
GTF3C2-202ENST00000359541 TUBGCP6Q96RT7 1819 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 AK2P54819 239 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 BOLA2Q9H3K6 86 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 A0A087WZG4 1122 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 KRT32Q14532 448 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 PDIA6Q15084 440 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 PLBD2Q8NHP8 589 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 KDM6AO15550 1401 aaPredicted RBP11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 PDCP20941 246 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 UBE3BQ7Z3V4 1068 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 COPRSQ9NQ92 184 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 CPDO75976 1380 aa11.14□□□□□ -0.63
GTF3C2-202ENST00000359541 MSNP26038 577 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 EAF2Q96CJ1 260 aaPredicted RBP11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 BLOC1S2Q6QNY1 142 aa11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 GAS2L3Q86XJ1 694 aa11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 ZDHHC9Q9Y397 364 aa11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 SASH1O94885 1247 aa11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 MEGF6O75095 1541 aa11.13□□□□□ -0.63
GTF3C2-202ENST00000359541 ESPNB1AK53 854 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 STX6O43752 255 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 NMIQ13287 307 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 LRRFIP1Q32MZ4 808 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 CYP27B1O15528 508 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 ZSCAN22P10073 491 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 EVA1CP58658 441 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 LRSAM1Q6UWE0 723 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 ALS2Q96Q42 1657 aa11.12□□□□□ -0.63
GTF3C2-202ENST00000359541 CLCN1P35523 988 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 TTC14Q96N46 770 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 FGD1P98174 961 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 IL25Q9H293 177 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 TSPY26PQ9H489 355 aa11.11□□□□□ -0.63
GTF3C2-202ENST00000359541 ATP5JP18859 108 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 TNNI3KQ59H18 835 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 FPGT-TNNI3KV9GXZ4 949 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 SYCE3A1L190 88 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 ATP5J2-PTCD1G3V325 749 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 MAP4K1Q92918 833 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 COL15A1P39059 1388 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 IL2RBP14784 551 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 PTH1RQ03431 593 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 KAZALD1Q96I82 304 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 ADAMTS7Q9UKP4 1686 aa11.1□□□□□ -0.63
GTF3C2-202ENST00000359541 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 GJB2P29033 226 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 NECTIN1Q15223 517 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 RABL6Q3YEC7 729 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 RBM27Q9P2N5 1060 aaKnown RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 KIF3AQ9Y496 699 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 MRC1P22897 1456 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 F13A1P00488 732 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 TFCP2Q12800 502 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 FAM227BQ96M60 508 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 SLC27A2O14975 620 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 SYT1P21579 422 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 LMBR1LQ6UX01 489 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 TICAM2Q86XR7 235 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 KCNB2Q92953 911 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
GTF3C2-202ENST00000359541 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 IL15P40933 162 aaPredicted RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 UBE2HP62256 183 aa11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 NAP1L5Q96NT1 182 aaPredicted RBP11.08□□□□□ -0.64
GTF3C2-202ENST00000359541 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms