RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 ATRIPQ8WXE1 791 aa23.47■■□□□ 1.35
EDC4-201ENST00000358933 ZNF213O14771 459 aa23.47■■□□□ 1.35
EDC4-201ENST00000358933 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
EDC4-201ENST00000358933 BRF1Q92994 677 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 LARP1Q6PKG0 1096 aaKnown RBP23.46■■□□□ 1.35
EDC4-201ENST00000358933 PPP1R42Q7Z4L9 355 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
EDC4-201ENST00000358933 MEIS3Q99687 375 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 DCTPP1Q9H773 170 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.46■■□□□ 1.351e-6■■□□□ 11.6
EDC4-201ENST00000358933 PHACTR2O75167 634 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 SAMD1Q6SPF0 538 aaPredicted RBP23.46■■□□□ 1.35
EDC4-201ENST00000358933 CCDC61Q9Y6R9 512 aa23.46■■□□□ 1.35
EDC4-201ENST00000358933 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.35
EDC4-201ENST00000358933 MTIF2P46199 727 aaKnown RBP23.45■■□□□ 1.35
EDC4-201ENST00000358933 CTAGE1Q96RT6 745 aa23.45■■□□□ 1.35
EDC4-201ENST00000358933 RHPN1Q8TCX5 695 aa23.45■■□□□ 1.34
EDC4-201ENST00000358933 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
EDC4-201ENST00000358933 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
EDC4-201ENST00000358933 TSG101Q99816 390 aa23.45■■□□□ 1.34
EDC4-201ENST00000358933 SSRP1Q08945 709 aaKnown RBP23.45■■□□□ 1.34
EDC4-201ENST00000358933 SLC12A7Q9Y666 1083 aa23.45■■□□□ 1.34
EDC4-201ENST00000358933 EVCP57679 992 aa23.44■■□□□ 1.34
EDC4-201ENST00000358933 ATP2C2O75185 946 aa23.44■■□□□ 1.34
EDC4-201ENST00000358933 TRHP20396 242 aaPredicted RBP23.44■■□□□ 1.34
EDC4-201ENST00000358933 HDXQ7Z353 690 aa23.44■■□□□ 1.34
EDC4-201ENST00000358933 C17orf53Q8N3J3 647 aaPredicted RBP23.44■■□□□ 1.34
EDC4-201ENST00000358933 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
EDC4-201ENST00000358933 GOLGA8AA7E2F4 631 aa23.44■■□□□ 1.34
EDC4-201ENST00000358933 IARSP41252 1262 aaKnown RBP23.44■■□□□ 1.34
EDC4-201ENST00000358933 AKAP2Q9Y2D5 859 aa23.43■■□□□ 1.34
EDC4-201ENST00000358933 PLEKHM2Q8IWE5 1019 aa23.43■■□□□ 1.34
EDC4-201ENST00000358933 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
EDC4-201ENST00000358933 CEP57Q86XR8 500 aa23.43■■□□□ 1.34
EDC4-201ENST00000358933 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
EDC4-201ENST00000358933 CYLC1P35663 651 aaPredicted RBP23.42■■□□□ 1.34
EDC4-201ENST00000358933 AK2P54819 239 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 CCDC82Q8N4S0 544 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 LMBRD1Q9NUN5 540 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 IFNKQ9P0W0 207 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 TCEANC2Q96MN5 208 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 GSTTP1A0A1W2PQM5 241 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 SPAG1Q07617 926 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 GBP6Q6ZN66 633 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 MPHOSPH8Q99549 860 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 TAOK3Q9H2K8 898 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 PYM1Q9BRP8 204 aaKnown RBP23.42■■□□□ 1.34
EDC4-201ENST00000358933 NAPBQ9H115 298 aa23.42■■□□□ 1.34
EDC4-201ENST00000358933 MRPL50Q8N5N7 158 aaKnown RBP23.41■■□□□ 1.34
EDC4-201ENST00000358933 AKR1B10O60218 316 aa23.41■■□□□ 1.34
EDC4-201ENST00000358933 PPP1R12BO60237 982 aaPredicted RBP23.41■■□□□ 1.34
EDC4-201ENST00000358933 CETN2P41208 172 aa23.41■■□□□ 1.34
EDC4-201ENST00000358933 CAMSAP2Q08AD1 1489 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 HSP90AA4PQ58FG1 418 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 CABP4P57796 275 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 ELF2Q15723 593 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 TMCO5BA8MYB1 307 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 PPFIA3O75145 1194 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 PPP2R3AQ06190 1150 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 CCDC121Q6ZUS5 278 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 ASXL1Q8IXJ9 1541 aa23.4■■□□□ 1.34
EDC4-201ENST00000358933 VGLL3A8MV65 326 aa23.39■■□□□ 1.34
EDC4-201ENST00000358933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.39■■□□□ 1.34
EDC4-201ENST00000358933 FAM114A1Q8IWE2 563 aa23.39■■□□□ 1.34
EDC4-201ENST00000358933 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.34
EDC4-201ENST00000358933 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.34
EDC4-201ENST00000358933 RTL1A6NKG5 1358 aa23.39■■□□□ 1.34
EDC4-201ENST00000358933 IFIT3O14879 490 aaKnown RBP23.39■■□□□ 1.33
EDC4-201ENST00000358933 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
EDC4-201ENST00000358933 MSL1Q68DK7 614 aa23.38■■□□□ 1.33
EDC4-201ENST00000358933 GOLIM4O00461 696 aa23.38■■□□□ 1.33
EDC4-201ENST00000358933 TRIM21P19474 475 aaKnown RBP23.38■■□□□ 1.33
EDC4-201ENST00000358933 RHOXF2BP0C7M4 288 aa23.38■■□□□ 1.33
EDC4-201ENST00000358933 CTCFLQ8NI51 663 aaPredicted RBP23.38■■□□□ 1.33
EDC4-201ENST00000358933 RHOXF2Q9BQY4 288 aa23.38■■□□□ 1.33
EDC4-201ENST00000358933 POLR3AO14802 1390 aaPredicted RBP23.37■■□□□ 1.33
EDC4-201ENST00000358933 KARSQ15046 597 aaKnown RBP23.37■■□□□ 1.33
EDC4-201ENST00000358933 FAM76AQ8TAV0 307 aa23.37■■□□□ 1.33
EDC4-201ENST00000358933 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
EDC4-201ENST00000358933 ARFGAP2Q8N6H7 521 aa23.37■■□□□ 1.33
EDC4-201ENST00000358933 FSD2A1L4K1 749 aa23.36■■□□□ 1.33
EDC4-201ENST00000358933 DBF4Q9UBU7 674 aaPredicted RBP23.36■■□□□ 1.33
EDC4-201ENST00000358933 TSC1Q92574 1164 aa23.36■■□□□ 1.33
EDC4-201ENST00000358933 LZTFL1Q9NQ48 299 aa23.36■■□□□ 1.33
EDC4-201ENST00000358933 SPTLC2O15270 562 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 METAP2P50579 478 aaKnown RBP eCLIP23.35■■□□□ 1.332e-6■■□□□ 14.4
EDC4-201ENST00000358933 NME9Q86XW9 330 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 ZNF569Q5MCW4 686 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 CCDC114Q96M63 670 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 TMEM63CQ9P1W3 806 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 UBE4AQ14139 1066 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 METTL24Q5JXM2 366 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 HYPKQ9NX55 129 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 NOP2P46087 812 aaKnown RBP23.35■■□□□ 1.33
EDC4-201ENST00000358933 PPM1EQ8WY54 764 aa23.35■■□□□ 1.33
EDC4-201ENST00000358933 NSRP1Q9H0G5 558 aaKnown RBP23.35■■□□□ 1.33
EDC4-201ENST00000358933 FAM83GA6ND36 823 aa23.34■■□□□ 1.33
EDC4-201ENST00000358933 TACC1O75410 805 aa23.34■■□□□ 1.33
EDC4-201ENST00000358933 ZNF75DP51815 510 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms