RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 POLR3GO15318 223 aaPredicted RBP15.9■□□□□ 0.14
VCP-201ENST00000358901 RBM25P49756 843 aaKnown RBP15.9■□□□□ 0.14
VCP-201ENST00000358901 TXLNBQ8N3L3 684 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
VCP-201ENST00000358901 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 CHMLP26374 656 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 SSRP1Q08945 709 aaKnown RBP15.9■□□□□ 0.14
VCP-201ENST00000358901 SLC39A6Q13433 755 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 SNW1Q13573 536 aaKnown RBP15.9■□□□□ 0.14
VCP-201ENST00000358901 ANKRD24Q8TF21 1146 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 CRACR2AQ9BSW2 395 aa15.9■□□□□ 0.14
VCP-201ENST00000358901 CASQ1P31415 396 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 TMEM67Q5HYA8 995 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 CCDC148Q8NFR7 591 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 PPIP5K1Q6PFW1 1433 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 KIAA0754O94854 1291 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 ERLIN2O94905 339 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
VCP-201ENST00000358901 CAVIN4Q5BKX8 364 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 IQCEQ6IPM2 695 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 MKNK2Q9HBH9 465 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 RDXP35241 583 aaKnown RBP15.89■□□□□ 0.13
VCP-201ENST00000358901 CCDC102BQ68D86 513 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 GBP3Q9H0R5 595 aa15.89■□□□□ 0.13
VCP-201ENST00000358901 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 NCOA7Q8NI08 942 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 ALDH1L1O75891 902 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.13
VCP-201ENST00000358901 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 CEP135Q66GS9 1140 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
VCP-201ENST00000358901 UHRF1BP1Q6BDS2 1440 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 SKILP12757 684 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
VCP-201ENST00000358901 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 SLC5A1P13866 664 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 ZSCAN29Q8IWY8 852 aaPredicted RBP15.87■□□□□ 0.13
VCP-201ENST00000358901 INTS4Q96HW7 963 aaKnown RBP15.87■□□□□ 0.13
VCP-201ENST00000358901 NMIQ13287 307 aaPredicted RBP15.87■□□□□ 0.13
VCP-201ENST00000358901 SPA17Q15506 151 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 Q6ZUG5 572 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 G2E3Q7L622 706 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 ZNF397Q8NF99 534 aaPredicted RBP15.87■□□□□ 0.13
VCP-201ENST00000358901 CPA1P15085 419 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
VCP-201ENST00000358901 SLC26A6Q9BXS9 759 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
VCP-201ENST00000358901 A2MP01023 1474 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 NPC1L1Q9UHC9 1359 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 CWF19L2Q2TBE0 894 aaKnown RBP15.86■□□□□ 0.13
VCP-201ENST00000358901 HSP90AB3PQ58FF7 597 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 LINS1Q8NG48 757 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 SYKP43405 635 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 ZSWIM4Q9H7M6 989 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 RRAGDQ9NQL2 400 aaPredicted RBP15.86■□□□□ 0.13
VCP-201ENST00000358901 SEPT11Q9NVA2 429 aaKnown RBP15.86■□□□□ 0.13
VCP-201ENST00000358901 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
VCP-201ENST00000358901 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
VCP-201ENST00000358901 SYT1P21579 422 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 GNG11P61952 73 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 NPHP3Q7Z494 1330 aa15.86■□□□□ 0.13
VCP-201ENST00000358901 NLRP5P59047 1200 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
VCP-201ENST00000358901 MCMDC2Q4G0Z9 681 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 EYA1Q99502 592 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
VCP-201ENST00000358901 RBM5P52756 815 aaKnown RBP eCLIP15.85■□□□□ 0.13
VCP-201ENST00000358901 TYRO3Q06418 890 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 TAF4BQ92750 862 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 PAXBP1Q9Y5B6 917 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 CCDC194A0A1B0GVG4 234 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 MRPS27Q92552 414 aaKnown RBP15.85■□□□□ 0.13
VCP-201ENST00000358901 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 TAF3Q5VWG9 929 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
VCP-201ENST00000358901 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 HS1BP3Q53T59 392 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 CATIPQ7Z7H3 387 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 TRERF1Q96PN7 1200 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 DNA2P51530 1060 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 FKBP15Q5T1M5 1219 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 UBASH3AP57075 661 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 ZNF652Q9Y2D9 606 aa15.84■□□□□ 0.13
VCP-201ENST00000358901 ENOX2Q16206 610 aaKnown RBP15.83■□□□□ 0.13
VCP-201ENST00000358901 CREB3L3Q68CJ9 461 aa15.83■□□□□ 0.13
VCP-201ENST00000358901 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.13
VCP-201ENST00000358901 TAX1BP1Q86VP1 789 aa15.83■□□□□ 0.13
VCP-201ENST00000358901 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.13
VCP-201ENST00000358901 TTC41PQ6P2S7 1318 aa15.83■□□□□ 0.13
VCP-201ENST00000358901 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.12
VCP-201ENST00000358901 MFSD6Q6ZSS7 791 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms