RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 N4BP3O15049 544 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 DNAI1Q9UI46 699 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 STX6O43752 255 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 KRT222Q8N1A0 295 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 VPS18Q9P253 973 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
COL11A1-202ENST00000358392 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
COL11A1-202ENST00000358392 ZEB2O60315 1214 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 PPARDQ03181 441 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 NEMFO60524 1076 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 AMPD3Q01432 767 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 ANO6Q4KMQ2 910 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
COL11A1-202ENST00000358392 DDX19AQ9NUU7 478 aaKnown RBP12.8□□□□□ -0.36
COL11A1-202ENST00000358392 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 ANKRD30BQ9BXX2 1392 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 TBC1D5Q92609 795 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 MRVI1Q9Y6F6 885 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 PAXBP1Q9Y5B6 917 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 RRAGBQ5VZM2 374 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 FERMT1Q9BQL6 677 aa12.8□□□□□ -0.36
COL11A1-202ENST00000358392 GOLIM4O00461 696 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 ZPR1O75312 459 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 NDC80O14777 642 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 STARD3NLO95772 234 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 FLIIQ13045 1269 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 EHMT1Q9H9B1 1298 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 AKR1B10O60218 316 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-202ENST00000358392 TMPOP42166 694 aaKnown RBP12.79□□□□□ -0.36
COL11A1-202ENST00000358392 CCDC121Q6ZUS5 278 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 PHACTR2O75167 634 aa12.79□□□□□ -0.36
COL11A1-202ENST00000358392 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 SLC5A1P13866 664 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CAPN2P17655 700 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CCDC174Q6PII3 467 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 TTC31Q49AM3 519 aaPredicted RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 IFT81Q8WYA0 676 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 ANAPC4Q9UJX5 808 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 NOL3O60936 208 aaKnown RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
COL11A1-202ENST00000358392 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 ANKRD50Q9ULJ7 1429 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CTAGE15A4D2H0 777 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 GOLGA6L9A6NEM1 432 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CTAGE8P0CG41 777 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 GPTP24298 496 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 UBA7P41226 1012 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CTAGE4Q8IX94 777 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 CUX1P39880 1505 aa12.78□□□□□ -0.36
COL11A1-202ENST00000358392 IFI16Q16666 785 aaKnown RBP12.77□□□□□ -0.36
COL11A1-202ENST00000358392 SMC6Q96SB8 1091 aa12.77□□□□□ -0.36
COL11A1-202ENST00000358392 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.36
COL11A1-202ENST00000358392 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
COL11A1-202ENST00000358392 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.36
COL11A1-202ENST00000358392 KAT14Q9H8E8 782 aa12.77□□□□□ -0.36
COL11A1-202ENST00000358392 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
COL11A1-202ENST00000358392 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.37
COL11A1-202ENST00000358392 NFE2L2Q16236 605 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 SELENOOQ9BVL4 669 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 SEPT6Q14141 434 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 C10orf67Q8IYJ2 551 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
COL11A1-202ENST00000358392 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 RASAL2Q9UJF2 1139 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 SH3BP5O60239 455 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 STAT6P42226 847 aa12.77□□□□□ -0.37
COL11A1-202ENST00000358392 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
COL11A1-202ENST00000358392 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
COL11A1-202ENST00000358392 IVLP07476 585 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms