RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 UBN2Q6ZU65 1347 aa21.16■□□□□ 0.98
TPM1-205ENST00000357980 APBB1O00213 710 aa21.16■□□□□ 0.98
TPM1-205ENST00000357980 PCCAP05165 728 aaPredicted RBP21.16■□□□□ 0.98
TPM1-205ENST00000357980 GPTP24298 496 aa21.16■□□□□ 0.98
TPM1-205ENST00000357980 FOXO4P98177 505 aa21.16■□□□□ 0.98
TPM1-205ENST00000357980 UBR3Q6ZT12 1888 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
TPM1-205ENST00000357980 SURF6O75683 361 aaKnown RBP21.15■□□□□ 0.98
TPM1-205ENST00000357980 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
TPM1-205ENST00000357980 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 GNPATO15228 680 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 RAB11FIP3O75154 756 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 RTL5Q5HYW3 569 aaPredicted RBP21.15■□□□□ 0.98
TPM1-205ENST00000357980 SLC27A3Q5K4L6 730 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 MYH3P11055 1940 aa21.15■□□□□ 0.98
TPM1-205ENST00000357980 RGL2O15211 777 aa21.14■□□□□ 0.97
TPM1-205ENST00000357980 BACH2Q9BYV9 841 aa21.14■□□□□ 0.97
TPM1-205ENST00000357980 ZBTB47Q9UFB7 747 aaPredicted RBP21.14■□□□□ 0.97
TPM1-205ENST00000357980 CDHR2Q9BYE9 1310 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 C8orf34Q49A92 452 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 HSP90AB4PQ58FF6 505 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 CLEC4GQ6UXB4 293 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 AMIGO3Q86WK7 504 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 C16orf71Q8IYS4 520 aaPredicted RBP21.13■□□□□ 0.97
TPM1-205ENST00000357980 PLA2G12BQ9BX93 195 aa21.13■□□□□ 0.97
TPM1-205ENST00000357980 PA2G4Q9UQ80 394 aaKnown RBP21.13■□□□□ 0.97
TPM1-205ENST00000357980 RFX5P48382 616 aaPredicted RBP21.12■□□□□ 0.97
TPM1-205ENST00000357980 FAM161AQ3B820 660 aa21.12■□□□□ 0.97
TPM1-205ENST00000357980 FAM89AQ96GI7 184 aa21.12■□□□□ 0.97
TPM1-205ENST00000357980 RTCBQ9Y3I0 505 aaKnown RBP21.12■□□□□ 0.97
TPM1-205ENST00000357980 RGPD3A6NKT7 1758 aaPredicted RBP21.12■□□□□ 0.97
TPM1-205ENST00000357980 RGPD4Q7Z3J3 1758 aa21.12■□□□□ 0.97
TPM1-205ENST00000357980 LMBR1LQ6UX01 489 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 OTUD7AQ8TE49 926 aaPredicted RBP21.11■□□□□ 0.97
TPM1-205ENST00000357980 ZNF652Q9Y2D9 606 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 LAMB2P55268 1798 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 RHPN1Q8TCX5 695 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
TPM1-205ENST00000357980 SALL3Q9BXA9 1300 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 PLSCR1O15162 318 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 SYNE4Q8N205 404 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 PROM2Q8N271 834 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 COPRSQ9NQ92 184 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 NARFQ9UHQ1 456 aa21.1■□□□□ 0.97
TPM1-205ENST00000357980 COL24A1Q17RW2 1714 aa21.09■□□□□ 0.97
TPM1-205ENST00000357980 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
TPM1-205ENST00000357980 TRMT112Q9UI30 125 aaKnown RBP21.09■□□□□ 0.97
TPM1-205ENST00000357980 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
TPM1-205ENST00000357980 PTPN12Q05209 780 aaKnown RBP21.08■□□□□ 0.97
TPM1-205ENST00000357980 TXNRD1Q16881 649 aa21.08■□□□□ 0.97
TPM1-205ENST00000357980 AK7Q96M32 723 aa21.08■□□□□ 0.97
TPM1-205ENST00000357980 BCL2L12Q9HB09 334 aa21.08■□□□□ 0.97
TPM1-205ENST00000357980 TUBGCP6Q96RT7 1819 aa21.08■□□□□ 0.97
TPM1-205ENST00000357980 SUSD4Q5VX71 490 aa21.08■□□□□ 0.96
TPM1-205ENST00000357980 ERC1Q8IUD2 1116 aa21.08■□□□□ 0.96
TPM1-205ENST00000357980 KLHDC4Q8TBB5 520 aa21.08■□□□□ 0.96
TPM1-205ENST00000357980 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.96
TPM1-205ENST00000357980 BMP2KLQ5H9B9 411 aa21.07■□□□□ 0.96
TPM1-205ENST00000357980 ARHGEF1Q92888 912 aaKnown RBP21.07■□□□□ 0.96
TPM1-205ENST00000357980 CSF1RP07333 972 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 OSBPL3Q9H4L5 887 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 IL1RAPL2Q9NP60 686 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 SRP68Q9UHB9 627 aaKnown RBP21.06■□□□□ 0.96
TPM1-205ENST00000357980 NTSR2O95665 410 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 ADRA2BP18089 450 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 OS9Q13438 667 aaPredicted RBP21.06■□□□□ 0.96
TPM1-205ENST00000357980 USPL1Q5W0Q7 1092 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
TPM1-205ENST00000357980 BCL11AQ9H165 835 aa21.06■□□□□ 0.96
TPM1-205ENST00000357980 RBM19Q9Y4C8 960 aaKnown RBP21.06■□□□□ 0.96
TPM1-205ENST00000357980 IRS4O14654 1257 aaPredicted RBP21.05■□□□□ 0.96
TPM1-205ENST00000357980 SASH1O94885 1247 aa21.05■□□□□ 0.96
TPM1-205ENST00000357980 APBA3O96018 575 aa21.05■□□□□ 0.96
TPM1-205ENST00000357980 G3BP1Q13283 466 aaKnown RBP eCLIP21.05■□□□□ 0.96
TPM1-205ENST00000357980 SIL1Q9H173 461 aa21.05■□□□□ 0.96
TPM1-205ENST00000357980 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
TPM1-205ENST00000357980 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
TPM1-205ENST00000357980 ZPR1O75312 459 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 HMGB2P26583 209 aaKnown RBP21.04■□□□□ 0.96
TPM1-205ENST00000357980 PDE1AP54750 535 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 CHMP3Q9Y3E7 222 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 GSPT1P15170 499 aaKnown RBP21.04■□□□□ 0.96
TPM1-205ENST00000357980 CTSWP56202 376 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 TTC22Q5TAA0 569 aa21.04■□□□□ 0.96
TPM1-205ENST00000357980 CASZ1Q86V15 1759 aa21.03■□□□□ 0.96
TPM1-205ENST00000357980 MX1P20591 662 aa21.03■□□□□ 0.96
TPM1-205ENST00000357980 TBC1D9BQ66K14 1250 aa21.03■□□□□ 0.96
TPM1-205ENST00000357980 STAP2Q9UGK3 403 aa21.03■□□□□ 0.96
TPM1-205ENST00000357980 PDE8AO60658 829 aa21.02■□□□□ 0.96
TPM1-205ENST00000357980 PHF14O94880 888 aa21.02■□□□□ 0.96
TPM1-205ENST00000357980 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
TPM1-205ENST00000357980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.02■□□□□ 0.96
TPM1-205ENST00000357980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
TPM1-205ENST00000357980 SSFA2P28290 1259 aa21.01■□□□□ 0.95
TPM1-205ENST00000357980 RFC4P35249 363 aa21.01■□□□□ 0.95
TPM1-205ENST00000357980 AOX1Q06278 1338 aa21■□□□□ 0.95
TPM1-205ENST00000357980 FAM177BA6PVY3 158 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms