RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MRVI1Q9Y6F6 885 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 PLEKHH1Q9ULM0 1364 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 TMEM57Q8N5G2 664 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 SMC6Q96SB8 1091 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 MKRN1Q9UHC7 482 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 PDE4BQ07343 736 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 GOLIM4O00461 696 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 TXNDC16Q9P2K2 825 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ANKS4BQ8N8V4 417 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 USP16Q9Y5T5 823 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 METAP2P50579 478 aaKnown RBP eCLIP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ZFP91Q96JP5 570 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 TRIM47Q96LD4 638 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ZSWIM4Q9H7M6 989 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ISM2Q6H9L7 571 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 RMND1Q9NWS8 449 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 KRT13P13646 458 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC8Q9H0W5 538 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 ANKRD50Q9ULJ7 1429 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC14Q49A88 953 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 RPAP2Q8IXW5 612 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 GMNNO75496 209 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 DPH6Q7L8W6 267 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 MICU3Q86XE3 530 aa6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 CDC5LQ99459 802 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-201ENST00000355086 STMN4Q9H169 189 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 NFE2L2Q16236 605 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 KIAA1524Q8TCG1 905 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 CCT6BQ92526 530 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 DDX19AQ9NUU7 478 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ANKRD30BQ9BXX2 1392 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 GPTP24298 496 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 GRM1Q13255 1194 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 MSL1Q68DK7 614 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 TMEM110-MUSTN1A8MSY1 372 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 CYLC1P35663 651 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 FAM212AQ96EL1 285 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 HYPKQ9NX55 129 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 SLC4A8Q2Y0W8 1093 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ZMYND15Q9H091 742 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 EEF2P13639 858 aaKnown RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 SLC26A6Q9BXS9 759 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 RPGRIP1LQ68CZ1 1315 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 TTC36A6NLP5 189 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC117Q8IWD4 279 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 PRPHP41219 470 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 MFSD6Q6ZSS7 791 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ZNF622Q969S3 477 aaKnown RBP eCLIP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 SPAG5Q96R06 1193 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 STAT6P42226 847 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ZNF644Q9H582 1327 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 SEPT6Q14141 434 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 FCHSD2O94868 740 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ADAMTS2O95450 1211 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 TAF7Q15545 349 aaPredicted RBP6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 GNG11P61952 73 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 PANK2Q9BZ23 570 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 N4BP3O15049 544 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 ST5P78524 1137 aa6.6□□□□□ -1.35
SRGAP1-201ENST00000355086 AKR1B10O60218 316 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 ORC3Q9UBD5 711 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 DNAAF4Q8WXU2 420 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 TERF1P54274 439 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 AMOTQ4VCS5 1084 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 MCM6Q14566 821 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 USP25Q9UHP3 1055 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 LDHCP07864 332 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 IARSP41252 1262 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 UBASH3AP57075 661 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 C16orf71Q8IYS4 520 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 SRRTQ9BXP5 876 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 MAK16Q9BXY0 300 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 DYNC1I1O14576 645 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 TAF12Q16514 161 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 MCM10Q7L590 875 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 TMPOP42166 694 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC102BQ68D86 513 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 NBPF7P0C2Y1 421 aaPredicted RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 SYKP43405 635 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 CCDC129Q6ZRS4 1044 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 GAS8O95995 478 aa6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 RPUSD2Q8IZ73 545 aaKnown RBP6.59□□□□□ -1.35
SRGAP1-201ENST00000355086 PPP4R3BQ5MIZ7 849 aa6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 CADPSQ9ULU8 1353 aa6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 PRPF31Q8WWY3 499 aaKnown RBP6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 HAUS7Q99871 368 aa6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 GJB2P29033 226 aa6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 IFIT1BQ5T764 474 aaKnown RBP6.59□□□□□ -1.36
SRGAP1-201ENST00000355086 PLS1Q14651 629 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 PLCB3Q01970 1234 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 TFIP11Q9UBB9 837 aaKnown RBP6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 CRCPO75575 148 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 SATB1Q01826 763 aa6.58□□□□□ -1.36
SRGAP1-201ENST00000355086 GEN1Q17RS7 908 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms