RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 AXDND1Q5T1B0 1012 aaPredicted RBP17.9■□□□□ 0.46
PTPRO-202ENST00000348962 STXBP4Q6ZWJ1 553 aa17.9■□□□□ 0.46
PTPRO-202ENST00000348962 KIAA1328Q86T90 577 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 ZMYM3Q14202 1370 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
PTPRO-202ENST00000348962 ANO10Q9NW15 660 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 HAND2P61296 217 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 ARHGAP29Q52LW3 1261 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 KLHL10Q6JEL2 608 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 MICU3Q86XE3 530 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 TMTC2Q8N394 836 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 EYA3Q99504 573 aa17.89■□□□□ 0.45
PTPRO-202ENST00000348962 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 NAA16Q6N069 864 aaPredicted RBP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 CACNA2D4Q7Z3S7 1137 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 NFATC2IPQ8NCF5 419 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 NEK1Q96PY6 1258 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 SAMM50Q9Y512 469 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 KRT23Q9C075 422 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 METAP2P50579 478 aaKnown RBP eCLIP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 ESR2Q92731 530 aa17.88■□□□□ 0.45
PTPRO-202ENST00000348962 PYM1Q9BRP8 204 aaKnown RBP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 NSFL1CQ9UNZ2 370 aaKnown RBP17.88■□□□□ 0.45
PTPRO-202ENST00000348962 TSPY3P0CV98 308 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 TSPY8P0CW00 308 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 UBA7P41226 1012 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 FAM177A1Q8N128 213 aaPredicted RBP17.87■□□□□ 0.45
PTPRO-202ENST00000348962 ORC3Q9UBD5 711 aaPredicted RBP17.87■□□□□ 0.45
PTPRO-202ENST00000348962 F8W031 263 aaPredicted RBP17.87■□□□□ 0.45
PTPRO-202ENST00000348962 MCM4P33991 863 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 MCM5P33992 734 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 SPA17Q15506 151 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 C20orf194Q5TEA3 1177 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 GNAQP50148 359 aa17.87■□□□□ 0.45
PTPRO-202ENST00000348962 ERLIN1O75477 346 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 IDEP14735 1019 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 PLCG2P16885 1265 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 BTG4Q9NY30 223 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 CNNM3Q8NE01 707 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 IQSEC3Q9UPP2 1182 aaPredicted RBP17.86■□□□□ 0.45
PTPRO-202ENST00000348962 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 WTAPQ15007 396 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 BMP2KLQ5H9B9 411 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
PTPRO-202ENST00000348962 CTAGE5O15320 804 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 POLKQ9UBT6 870 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 CCDC112Q8NEF3 446 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 LIG1P18858 919 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
PTPRO-202ENST00000348962 LRRC27Q9C0I9 530 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 B4DLN1 442 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 MRPL12P52815 198 aaKnown RBP17.85■□□□□ 0.45
PTPRO-202ENST00000348962 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
PTPRO-202ENST00000348962 NUP160Q12769 1436 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 TRAPPC3LQ5T215 181 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 CAMK4Q16566 473 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 SLC4A8Q2Y0W8 1093 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 TRMT1LQ7Z2T5 733 aaKnown RBP17.84■□□□□ 0.45
PTPRO-202ENST00000348962 MTERF4Q7Z6M4 381 aaKnown RBP17.84■□□□□ 0.45
PTPRO-202ENST00000348962 ANKRD2Q9GZV1 360 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
PTPRO-202ENST00000348962 TRPM2O94759 1503 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 TRAPPC8Q9Y2L5 1435 aa17.84■□□□□ 0.45
PTPRO-202ENST00000348962 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
PTPRO-202ENST00000348962 CCDC191Q8NCU4 936 aa17.83■□□□□ 0.45
PTPRO-202ENST00000348962 NPATQ14207 1427 aa17.83■□□□□ 0.45
PTPRO-202ENST00000348962 GRM1Q13255 1194 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 CCDC144CPQ8IYA2 1237 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 ERMNQ8TAM6 284 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 IP6K1Q92551 441 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 SLC26A6Q9BXS9 759 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 IRS4O14654 1257 aaPredicted RBP17.83■□□□□ 0.44
PTPRO-202ENST00000348962 MEIS3Q99687 375 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 VEZTQ9HBM0 779 aa17.83■□□□□ 0.44
PTPRO-202ENST00000348962 CCDC148Q8NFR7 591 aa17.82■□□□□ 0.44
PTPRO-202ENST00000348962 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.44
PTPRO-202ENST00000348962 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
PTPRO-202ENST00000348962 H0YHG0 523 aa17.82■□□□□ 0.44
PTPRO-202ENST00000348962 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
PTPRO-202ENST00000348962 GNPATO15228 680 aa17.81■□□□□ 0.44
PTPRO-202ENST00000348962 PICALMQ13492 652 aa17.81■□□□□ 0.44
PTPRO-202ENST00000348962 EZRP15311 586 aaKnown RBP17.81■□□□□ 0.44
PTPRO-202ENST00000348962 IFIT1BQ5T764 474 aaKnown RBP17.81■□□□□ 0.44
PTPRO-202ENST00000348962 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
PTPRO-202ENST00000348962 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
PTPRO-202ENST00000348962 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
PTPRO-202ENST00000348962 GRPEL1Q9HAV7 217 aa17.81■□□□□ 0.44
PTPRO-202ENST00000348962 ZBTB43O43298 467 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 SYCP3Q8IZU3 236 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
PTPRO-202ENST00000348962 EYA1Q99502 592 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms